Suncus etruscus (white-toothed pygmy shrew): 125997311
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Entry
125997311 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125997311
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125997311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125997311
03041 Spliceosome [BR:
setr03041
]
125997311
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125997311
mRNA cycle factors
Common to processing body (P body) and stress granule
125997311
Spliceosome [BR:
setr03041
]
Common components
Common spliceosomal components
hnRNP proteins
125997311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125997311
NCBI-ProteinID:
XP_049621716
LinkDB
All DBs
Position
19:complement(31599218..31600774)
Genome browser
AA seq
373 aa
AA seq
DB search
MVKSESSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF
VTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEH
HLRDSFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSLDKXVIQKYHTVNGHNCEVRK
ALSKQEMASASSSQRGRSGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGCGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGGFG
GGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcggagtcgtcccctaaagagcccgaacagctacggaagctcttcattgga
ggcttgagctttgaaacgaccgatgaaagtctgagaagccattttgagcaatggggcacc
ctgacagactgtgtggtaatgagagatcccaacaccaagcgatcccgaggatttgggttt
gttacgtatgccacagtggaggaagtggatgccgccatgaatgcaaggccgcacaaagtg
gatgggagagttgtggaaccaaagagggctgtctccagagaagattctcaaagacctggt
gctcacttaactgtgaaaaagatttttgtgggtggcattaaggaagacacggaagagcat
cacctaagagattcttttgaacagtatgggaaaattgaggtgattgaaatcatgactgac
cggggtagtggcaagaagagaggcttcgcttttgtgacatttgatgaccatgattccttg
gacaagnttgtcattcagaaataccatactgtgaatggccacaattgtgaagtaagaaaa
gccctgtctaagcaagagatggccagtgcttcatccagccaacgaggtcgaagtggctct
ggaaactttggtggtcgtggaggaggttttggtgggaatgacaactttggccgtggagga
aacttcagtgggcgaggtggctttggtggcagccgaggtggttgtggatatggtggcagt
ggggatggctataatggatttggcaatgatggtggttatggaggaggcggtcctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggaggaggcggaggcggctttggc
ggtggtagtggaagcaattttggaggtggtggaagttacaatgattttggcaactacaat
aatcagtcctcaaattttggacccatgaaggggggaaactttggaggtcgaagctcaggc
ccctatggtggtggaggccaatactttgccaaaccacgaaaccaaggtggctatggcggt
tccagcagtagcagtagctatggcagtggcagaaggttttaa
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