KEGG   Suncus etruscus (white-toothed pygmy shrew): 125997406
Entry
125997406         CDS       T09902                                 
Symbol
SORT1
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04142  Lysosome
setr04722  Neurotrophin signaling pathway
setr04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:setr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    125997406 (SORT1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    125997406 (SORT1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    125997406 (SORT1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR
Other DBs
NCBI-GeneID: 125997406
NCBI-ProteinID: XP_049621798
LinkDB
Position
19:complement(27864850..27949600)
AA seq 832 aa
MERPRGAASAGGLRLLVRLVHLVQLVLLLLPPPSTGLGLDRLDAPPPAPSAPVRWPRPGR
VAQPGRPLPPHGGRWRRSVPRGPRDGCGPDGPDLAARLANNTHQHVFDDLSGSVSLSWVG
DSTGVILVLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPEN
SGKVILTAEVSGGSRGGRIFRSSDFAKNFVQINLPFHPLTQMMYSPENSDYLLALSTENG
LWVSKNFGGKWEEIHKAVCLAKWGPKNIIFFTTFLNGSCKADLGALELRKTTDLGKNFKT
IGVKIYSFGLGGRFLFASVMAKDSTRRIHVSTDHGTTWSMAQLPSVGQEQFYSILAANDD
MVFMHVDAPGDTGYGTIFTSDDRGIVYSKSLDRHLYTATGGETDFTNVTSLRGVYITSVL
SEDNSIQTMITFDQGGQWKHLRKPENSECDATAKNKNKCSLHIHASYSISQKLNVPMAPL
SEPNVVGIVIAHGSVGDAISVMVPDVYLSDDGGYSWVKMLDGPHYYTILDSGSIIVAIEH
SSHPINVIKYSTDEGQCWQTYTFTSDPIYFTGLASEPGARSMNISIWGYTESFLTRQWIS
YTIDFKDILQRNCEEKDYSTWLAHSTDPGEYQDGCILGYKEEYLRLRKSSVCQNGRDYVV
TKQPSVCVCSLEDFLCDFGYFRPENDSKCEEQPELKGHDLEFCLYGQEEHLTTNGYRKIP
GDRCEGGVNPVREVKDLKKKCISNILSPEKQNSKSNSVPIILATVGLMLITVIAGVLIVK
KYVCGGRFLVHRYSVLQQHAEANGVDGVDTLDTASHANKRGYHDDSDEDLLE
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggagcggccccggggagctgcgagtgcgggcggcctgcgcctcctcgtccgcctcgtc
cacctcgtccagctcgtcctcctgctgctgccgccgccttccaccggcctcggcctcgac
cggctggacgcgccgccgcccgcgccctcggccccggtgcgctggccccggcccgggagg
gtcgcgcagcccggacgcccgctgcccccgcacggaggccgttggcgccgcagcgtcccc
cgagggcctcgcgacggctgcggccccgacggccccgacctggccgcccgcctcgccaac
aacacgcaccagcatgtctttgatgatctcagtggctcagtgtccttgtcttgggttgga
gacagcaccggggtcattttggttttgactaccttccatgtgcccctggtaattatgact
tttggacagtccaagttatatcgaagtgaggactacggaaagaacttcaaggatattaca
aatctaatcaacaacacctttattcgaacggaatttggcatggctattggtcctgagaac
tctggaaaggtgattttgacagcagaagtctcaggaggaagtcgaggaggtcgaatcttc
agatcatcagattttgcaaagaattttgttcagatcaacctccctttccaccctctgact
cagatgatgtacagtcctgagaattcggactatcttctagctctcagcactgaaaatggc
ctgtgggtgtccaagaattttgggggaaaatgggaagaaatccacaaagcagtgtgtttg
gccaaatggggaccaaaaaacatcatcttctttaccacctttttgaatggctcttgcaaa
gctgatcttggtgcactggagttacggaaaaccacagacttggggaaaaacttcaaaacc
attggtgtgaaaatctactcatttggtcttgggggacgttttctttttgcctcagtgatg
gctaaggattccacaagaaggattcatgtatcaacagaccatgggactacatggagcatg
gcccagcttccctctgtggggcaggaacagttctattctatcctggcagctaacgatgac
atggtgttcatgcatgtagatgcacctggagatactgggtatggcacaatcttcacctca
gatgaccgaggcattgtctattccaaatccttggaccggcacctctacaccgccacaggt
ggagaaacagactttaccaacgtgacttcccttcgtggggtctacataacaagtgtgctt
tctgaagataattctatccagacaatgatcacctttgaccaaggaggacaatggaagcac
ctaaggaagcctgagaacagtgaatgtgatgccacagcaaaaaataagaataagtgcagc
cttcatattcatgcctcctacagcatctcccagaaactcaatgtgccaatggctccactc
tcagagcccaatgttgtgggtatagtcatcgcccatggtagcgtgggggatgccatctca
gtgatggtcccagatgtgtacctctcagacgacggcggctactcctgggtgaagatgctg
gatgggcctcactattacaccatcctggactctggaagtatcattgtggccattgagcac
agcagccatcctatcaatgtgattaagtattccacagacgaaggtcagtgctggcaaacc
tacacgttcaccagtgatcccatctactttactggcctggcttccgaacctggagctcga
tccatgaatatcagcatctggggttacacagaatctttcctgactcgccagtggatctcc
tacaccatcgactttaaagacattcttcagaggaactgtgaagagaaggactatagcaca
tggctagcccactccaccgaccctggagagtaccaagatggctgcattcttggttacaaa
gaagagtaccttcggctccgcaagtcatcggtctgtcagaatggacgggattatgtcgtc
accaagcagccgtccgtctgtgtctgctccctagaagacttcctctgtgattttggctat
ttccgtccggaaaatgactccaaatgtgaggaacagccagagctgaagggccatgacctt
gagttttgtctttatggacaagaggagcatctgaccaccaacgggtaccggaagattcct
ggtgacagatgtgagggtggagtgaatccagttcgagaagtcaaagacttgaaaaagaaa
tgcataagcaacattttgagtccagaaaagcaaaactccaagtcaaattcagttccaatt
atcctggccactgtggggttgatgctgatcacagttatagcgggagtactcatcgtgaag
aaatacgtgtgtgggggaaggttcctagtgcaccggtactcagttctacaacagcatgca
gaagccaacggtgtggatggtgtggatactttggacactgcctcccatgctaacaagcgt
ggttaccatgacgattctgatgaggaccttctggaataa

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