Suncus etruscus (white-toothed pygmy shrew): 125997414
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Entry
125997414 CDS
T09902
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
125997414 (TRMT13)
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
125997414 (TRMT13)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125997414 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
125997414
NCBI-ProteinID:
XP_049621805
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All DBs
Position
19:19614402..19637040
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AA seq
482 aa
AA seq
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MAASAPTAPHGTGFPAEGRCGYFVEKKKRFCRMVVAAGKRFCGEHAGAAEEENSRKRILC
PLDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEVPEHVVPISSLSEEQL
ENLIKKLRKACKGLNSTLKNQIMSHPALHDALNDPKNGDSAAKHLKQQASILGNIEKLKL
LGPGRCFIEFGAGKGKLSHWVDIALKDAENVHFILVEKVTTRFKVDGKHRKEKSVFQRLQ
IDIQHLCLNKIPILNKEKLPVVGIGKHLCGVATDLSLRCLVETYAASCVERNEEPLAKRI
KNDKTEKETNTVAKVASENAVPAKWTPVAGIVIALCCHHRCEWRHYVGKEYFKTLGLGAL
EFHYFQRMSSWATCGLRKTSLEASNMIKRRKECQNVDSEEHDDEGDRNTEDSAESAPGYL
TVEEKKKIGHLCKLLIDQGRIEYLQQKGFNPALQYYTDPVVSLENVLLTALPVHSSSPET
VI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttctgcacccactgcaccccatgggactggctttccagctgagggtcggtgt
ggctacttcgtggaaaaaaaaaagaggttctgcaggatggtggtagcagcagggaagaga
ttctgcggggagcacgctggagctgcagaggaagaaaattctcggaaaagaatcctatgt
cctttagatccaaaacacactgtatatgaagatcaacttgcaaagcatttgaaaaaatgt
aactcaagagagaaaccaaaacctgacttctttattcaagatattaatgcaggcttgaaa
gatgaaaccgaagtacctgaacatgtggttccaatttcttctctctctgaagagcagcta
gaaaacttaattaagaaattgagaaaagcgtgtaaaggtttgaattctacacttaaaaat
caaattatgtcccacccagcattgcatgatgcccttaatgaccctaagaatggggattct
gcagccaaacacttgaaacagcaggcttctattttaggtaacattgaaaaactaaagtta
cttggcccaggaagatgcttcattgagtttggtgccggaaaaggaaaattatctcattgg
gttgatattgccttaaaagatgctgaaaacgttcattttatcctcgtggagaaggtgacc
acaagattcaaggtagacggcaaacataggaaggaaaagtcagtttttcaaagacttcaa
atcgatattcagcacttgtgcttgaacaagattcctatactaaacaaagaaaaactccca
gtagtaggaattggaaagcatctttgtggtgtggcaacagatctttctttacgatgtttg
gtcgagacctatgctgccagttgtgtcgaaagaaatgaagaacctttagccaaacgcatc
aagaatgataaaacagaaaaagaaacgaacactgtggccaaggtagcaagtgaaaatgct
gtcccagcgaagtggactcctgtggctggcattgtcattgcactgtgttgtcaccacagg
tgtgaatggaggcattatgtgggcaaagaatatttcaagactttaggccttggagcattg
gaattccactatttccagcgaatgagtagttgggcaacttgtggcttgcggaagacatcg
ttggaagcctcaaacatgatcaagaggagaaaagagtgtcaaaatgtggatagtgaagag
catgatgacgagggagacagaaacacagaggacagtgctgagagtgctcctgggtatctt
actgttgaagaaaagaagaaaataggacacctctgtaaattgctgattgaccaaggccga
attgagtatttgcaacagaaaggattcaatcctgctctccagtattatacagatcctgtg
gtgtctttggaaaatgtattgttgactgctttaccagttcactcttcatcaccagagaca
gttatttaa
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