Suncus etruscus (white-toothed pygmy shrew): 125997441
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Entry
125997441 CDS
T09902
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125997441 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125997441 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
125997441 (VPS28)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125997441 (VPS28)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125997441 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
125997441 (VPS28)
Exosomal proteins of colorectal cancer cells
125997441 (VPS28)
Exosomal proteins of bladder cancer cells
125997441 (VPS28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
125997441
NCBI-ProteinID:
XP_049621826
LinkDB
All DBs
Position
19:complement(44253661..44255876)
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AA seq
221 aa
AA seq
DB search
MFHGIPATQAGGAPVNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTV
SQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttccacggcatcccagccacgcaggcggggggagcccctgtgaacaagccagagctg
tatgaggaagtcaagctgtacaaaaacgcacgggagcgagagaagtatgacaacatggca
gagctgtttgctgtagtgaagaccatgcaggccctggagaaggcctatatcaaggactgc
gtcacccccaatgagtacactgccgcctgctctcgcctcctggtccagtacaaagccgcc
ttccgtcaggtccagggctcagaaattagctccattgatgaattctgccgcaagttccgc
ctggactgtccactcgccatggagaggatcaaggaggaccggcccatcactatcaaggat
gacaagggcaacctgaaccgctgcattgcagacgtcgtctcgctctttatcacggtgatg
gacaagctgcggctggagatccgagccatggacgagattcagcctgacctcagggagctg
atggagaccatgcaccgcatgagccacttgcccccagacttcgagggccgccagactgtc
agtcagtggctacagaccctgagtggcatgtcggcttccgatgaactggacgattcccag
gtgcgtcagatgctgtttgacctggagtcggcctacaatgccttcaaccgctttctgcat
gcctga
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integrated database retrieval system
