Suncus etruscus (white-toothed pygmy shrew): 125997465
Help
Entry
125997465 CDS
T09902
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
125997465 (TTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
125997465 (TTF2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125997465 (TTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
125997465
NCBI-ProteinID:
XP_049621858
LinkDB
All DBs
Position
19:complement(6541369..6597496)
Genome browser
AA seq
1164 aa
AA seq
DB search
MELVSCPEHGTFCLLKTGVRPGVNQGKSFYLCGVRTCSFLRVTDIPVSHCLLHEGFVVEL
QGLLTPQSKNEYRLFFRCSKSKAEGKKWCGNVPWQAPTLQEEHGVASQSQPASKPFHYPS
SEQRNPFKVLNKNQEPSRWKQANSEKKWNDEKPSKKEDRFSDQKKQPKPESVNEEKPQEP
ECRNKKMEQKPKSDSWVEKDFSSGLALNSKQAAIQEKQRLETREKQSETKEIPGAPQKDL
LVISSREGHGGDRTKSSVSVPKKPNGEGHLVKKGPVPPREKEIRTLPPVAPSQNPISKPQ
KSEPHSKEHPKTLETSKTEDSRGSQTIGQAQLPGHVQALPGPVRGPAALATGLSWEARRA
ADPSSSDSEEDEAVSASQMPGSPLLFDETPNSGEKEHPKLSAQSVQKNPSLVSSVSKKVE
TVDPVARRVYLSAQLKQKKGTLASVNVQALPDKGQKLHKQIQELEDALSSLALCPEQADT
PETNNTQAPQQSNFRSTADVPHLVPPQPLQVQQLQSQHSLGLKTVGKNSLSHLDPLHSVW
KVTREAIEELHQSLKSRPDESAMVEDPAGLKFPLLMHQKQALAWLLWRESQKPQGGILAD
DMGLGKTLTMIALILIQKNQERIKEKDDTTSTWLSRDESSMVVSHGTLIVCPASLIHHWK
KEVEKCVCKNKLRVYLYHGPNRDQRAKVLATHDIVITTYSILAKEIPVKKQEEESPGRDL
SMEKSSTPLLRIVWARIILDEAHNIKNPRVQTSRAVCQLQARARWAVTGTPIQNNLLDMY
SLLKFLQCSPFDDFNLWKSQVDNGSQKGGERLSIVTKSLLLRRTKDQLDSCGKPLVTLPQ
RKFQLHHLKLSEAEESVYSVLFARSRLAMQSYLKRYESGDYKTGRSPENPFCRVAQEFGP
TGSANVDVDSPRSSTVHILSQLLRLRQCCCHLSLLKSALNMTELKEEGLVLSLEEQLGAL
TLSELQMSTTSSMVSLNGKCFQAELFEDRRESTKISSLLAELEAIRRHSGSQKSVIVSQW
TSMLKVVALHLKRHGLTYATIDGSVNPKQRMDLVEAFNSSRGPQVMLISLLAGGVGLNLT
GGNHLFLLDMHWNPSLEDQACDRIYRVGQEKDVVIHRFVCEGTVEEKISQLQERKKHLAK
QVLSGSGESRTKLTLADLRLLFGI
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggagttagtgagttgtccggagcacggcactttctgtctgctgaaaacgggggtccgc
cctggcgtgaatcaagggaagagcttctacttgtgcggggttcgaacctgcagcttctta
agagttaccgatattcctgtgtctcactgcttattgcatgaaggttttgtggtggaactt
cagggtttgcttacaccccagagtaagaatgagtacagattgttcttccgatgcagtaaa
agtaaggccgaggggaagaagtggtgtggaaatgtcccatggcaggcccctactctccaa
gaggaacatggtgtagccagtcagtcccagcctgcgtctaagccatttcattatccttcc
agtgagcagagaaaccctttcaaggtacttaacaagaatcaagaaccttctcgctggaaa
caggctaacagtgagaaaaagtggaatgatgagaagccaagcaaaaaggaagaccggttc
tcggatcagaagaagcagccgaaacctgaatctgtgaatgaagagaagccacaggaacct
gagtgcaggaataagaagatggagcagaaacccaaatctgacagctgggtggagaaggat
ttctcttctggcctggcacttaactcaaagcaagctgccattcaagagaagcagcgactg
gagacaagagagaaacagagtgaaacaaaagagatcccaggagccccccagaaagatctt
ttggtgatttcatccagagagggccacggtggtgacagaacaaaatcctctgtgtccgtg
cctaagaaaccaaatggggagggccaccttgtgaaaaaaggaccagtacctcctagagaa
aaggaaatcagaactttgcctccagtggctcctagtcagaatccgataagcaagccccaa
aagagcgaaccccacagcaaggagcaccccaagactttggagacaagcaagacagaggac
agtcggggctctcagaccatcgggcaggcgcagctccccgggcatgtccaggctttgcca
ggaccagtcagaggtcctgcagcattggccaccgggctgtcctgggaagcgaggcgagct
gctgaccccagcagcagtgacagcgaggaagatgaggcggtctctgcgtcccagatgcca
gggagccccttgctcttcgatgagactccaaactctggggaaaaggagcatcctaaactc
tctgctcagagtgtgcagaaaaacccgtctcttgtttcaagcgtttccaagaaggtggaa
actgtggacccggtagcccgacgtgtgtacctcagcgcacagctgaagcagaagaagggc
acactggcatcagtgaacgtccaggctcttccagacaagggtcagaaactgcacaagcaa
attcaggagctggaggacgcgcttagctcgctagccctctgccccgagcaagcagacact
cctgagacaaataatactcaagcaccacaacagagtaacttcagaagtaccgccgatgtt
ccccacttggtgccgcctcaacctctgcaggtccaacagctccagtctcagcattctctg
ggactgaaaactgtcggaaaaaacagcctttcgcacctcgacccgttgcattctgtgtgg
aaagtcacaagagaagccattgaggagctacatcagtccctgaagtcgcgtcctgatgag
tccgccatggtagaggaccccgctgggttgaagttccctttgctgatgcatcagaaacag
gcgttagcctggttactatggcgggaaagtcagaagccacaaggaggaattctggcggat
gacatgggattagggaaaaccctgacaatgatcgcactcattctcatccagaagaatcaa
gagagaatcaaggagaaggacgacacgacttcaacttggctttcgagagatgagtcctct
atggttgtttctcatggaacattaattgtctgtcctgcttccttgatccatcactggaaa
aaagaagtggagaaatgcgtgtgcaagaacaaactcagagtctatctttatcatgggcca
aaccgggaccagcgtgccaaagttcttgctacgcatgacatcgtcatcaccacctacagc
atcctggccaaggagatccctgtaaagaagcaagaggaagagagcccaggtagagacctt
agcatggagaagtcctcaacacctttgcttcgaatagtctgggctcggatcatattggat
gaagctcacaatattaaaaacccccgagtgcagacttccagagctgtgtgtcagctacag
gcccgagctcgttgggcagtcaccgggacccccattcagaacaacttgttggatatgtat
tccctgctgaagttcctccaatgttctccatttgatgacttcaacctgtggaagagtcaa
gttgacaatggatcacagaaaggaggagaacggttaagtattgtgacgaagagccttctg
ctgcggagaacaaaggaccagctggattcctgtggcaagcccttggtgacgctgccccag
cgtaaattccagctgcaccatctcaagctttctgaagccgaagagtctgtgtacagtgtc
cttttcgcaagatcaaggttagccatgcagtcctacctaaagagatacgaaagcggggac
tacaaaaccggaagaagccctgaaaacccgttttgtagagtggcacaggagtttgggccc
actgggtctgcaaatgtggatgtggactcaccgagatccagtactgttcacatcttgtca
cagttgttacgtctccgccagtgctgctgtcatctgtcgctgctgaagtcggccctaaat
atgacagagctgaaggaagaaggcctggtcctctccctggaagagcagcttggtgctctg
actttgtccgaactccagatgtcaacaacctcttccatggtgtccctgaatggcaaatgt
ttccaggcggagctgtttgaagacaggagagaaagcaccaagatttcatctctgttggct
gagttggaggcaatccgaagacactcagggtcccagaagagtgtcattgtctcccaatgg
accagtatgctgaaagttgtcgcgttgcacctcaagaggcatggacttacctatgccacc
atcgacggttctgtcaaccctaaacagagaatggatttggtagaggcattcaacagctcc
aggggccctcaggtcatgctgatctctctcttggctggaggtgttggtttaaacctgact
ggaggaaaccatctttttcttctggatatgcactggaatccatcacttgaagatcaagct
tgtgaccgaatttaccgagtaggacaagagaaagatgttgtcatacacaggtttgtttgc
gagggaacagtagaggaaaagatctcgcagctccaagagagaaagaaacacttggctaaa
caggtgctgtccgggtctggagagtccaggaccaagctcaccttggctgaccttagactc
ctttttggcatctga
DBGET
integrated database retrieval system
