Suncus etruscus (white-toothed pygmy shrew): 125997467
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Entry
125997467 CDS
T09902
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125997467 (WDR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
125997467 (WDR3)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125997467 (WDR3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Utp12
DSE1_N
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_NOL10_N
CFAP251_N
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR41
ASA1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_SPT8
WDR54
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_like
Beta-prop_ACSF4
PAC11
Utp21
Beta-prop_RIG_1st
DUF6832
Motif
Other DBs
NCBI-GeneID:
125997467
NCBI-ProteinID:
XP_049621861
LinkDB
All DBs
Position
19:complement(5517760..5560213)
Genome browser
AA seq
943 aa
AA seq
DB search
MGLTKQYLRFVASAVFGLIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILI
LQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGG
SLASGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLREKNLLVTSGKDTMVKWWDLDT
QHCFKTMVGHRTEVWGLVLVSEGKRLITGASDSELRAWDLTFLQEVDDPEEPELKKAKRS
FPETQDKHEAEDVTSEAEEAPEDRILACRKVGSIMREGRDRVVNLAVDKTGRILACHGTD
SVLEIFSILSKEEIQKKRDKKMKKAKKKAKLNSCEGEEEDLEVSVEMTLQDEIQRLTNIR
TSAKIKSFDLFQSPQGELKAVFLLQNNLVELYSLNPSVAAPQPVRTSRITIGGHRSDVRT
LSFSSDNIAVLSASADSAKIWNRSTLQCIRTMTCEYALCSFFVPGDKQVIIGTKTGKLQI
YDLASGNLLEAIEAHDGALWSMSLSPDQHGFVTGGADQSVKFWDFELVKDKNSTQKRLSV
KQTRSLQLDEDVLCVNYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDIS
SDGALIATGSADRNVKIWGLDFGDCHKSLFAHEDSVMFLKFVPKSHLFFTAGKDRKIKQW
DGDKFEHIQTLEGHHQEVWCLAISPNGDYVVSSSHDKSLRLWEKTREPLILEEEREMERE
KEYEESVAKEDQPTVPGETQGDNYFTGKKTIETVKAAERIMEAIELYREETAKMKEHKAI
CKAAGKEVRLPVNPILMAYGNISPSAYVLEILKGIKSSELEEALLVLPFSYVPDMLKLFD
EFIQLGTDIELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVSQVRDVIGFNMA
GLDFLRRECEARSEVTFFADATSHLEEKKRKRKKREKLILTLT
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaccaagcaatacctccgctttgttgccagcgcagtatttgggcttattggc
agccaaaaaggcaatattgtctttgtgacgcttcgtggtgaaaagggacgctatgtggcg
gtgcctgcttgcgaacatgttttcatctgggatttaaggaaaggagagaagatcctcatt
cttcaagggcttaaacaagaagtcacttgcttgtgcccttccccagatgggcttcattta
gctgttggatatgaggatggatctatccgaatcttcagtctcctgagtggggaaggcaat
gtgacattcaatggacacaaagcagctatcacttccctgaagtatgatcagctgggaggc
agtttggcatctggctccaaggatacagatgtgatcgtgtgggatgtgattaatgaaagt
ggcctctaccgtctaaagggccacaaggatgctgtaacacaggtgttgtttctcagggaa
aagaacctgcttgtgacgagtgggaaagacaccatggtgaagtggtgggacctcgatacc
cagcactgcttcaaaacaatggtcggccaccgaactgaggtgtggggattggtgctggtg
tcagaaggaaagcgacttatcacaggagcttctgacagtgaactacgggcctgggacctg
acatttttgcaagaggttgatgatcccgaagaaccagagctcaagaaagccaaaagatca
ttccctgagacacaagacaaacatgaagcagaggatgtgacttctgaggcagaggaagct
ccagaagatcgaatccttgcttgcagaaaagttggttccataatgcgggaaggaagggac
agagttgtgaacctcgcggtggacaaaacaggcaggattcttgcttgtcatggaactgat
tctgtgctagaaatattttctatcctttccaaagaagaaattcagaagaaaagggataag
aagatgaagaaagcgaaaaagaaagccaaattaaattcttgtgaaggggaagaggaagat
cttgaagtcagtgttgaaatgactctgcaagatgaaatccaacggttgaccaatatcaga
acttctgccaaaatcaagtccttcgacttgtttcagtcccctcaaggagagttaaaggct
gtcttcctgctgcaaaacaacttggtagaattatattcactgaacccctccgtggcagct
cctcagccagtcaggactagtagaatcaccatcgggggccatcgcagtgatgtccgaacc
ctgtcattcagctcagacaatattgctgtcctttctgcctcggctgattctgctaagatc
tggaacagatcaacgctgcagtgtattcgtacaatgacctgcgaatatgcactctgctca
tttttcgtacctggtgacaagcaggtgatcataggaacaaagacaggaaaactgcaaatc
tatgacttggcctcgggaaatcttttggaggccatagaagcacatgatggcgccttatgg
tccatgtctctctctcctgatcagcatggctttgtgacgggaggtgccgatcagtctgtc
aaattctgggattttgagctggtaaaagataaaaatagtacgcaaaagcggctttctgtg
aagcagacccgatccttgcagctggatgaagatgttttgtgtgtcaattattctcccaat
caaaagttgttggctgtgtctttgctggactgtactgtgaaaattttctacgttgacact
ttaaagtttttcctctcactttatggacacaaactgcctgttatatgcatggacatctct
tctgatggagcactcatagctactggctctgccgacaggaatgtgaagatctggggtttg
gactttggagattgccacaagtccctctttgcacatgaggacagtgtgatgttcctaaag
tttgtgcccaaatctcacctcttcttcactgctggaaaagaccgtaagattaagcagtgg
gatggagataaatttgaacacatacaaactctggaggggcaccatcaggaagtctggtgc
ttggccatcagtcccaatggagactatgttgtgtcatcttcccatgacaaatccttgaga
ctctgggagaaaacaagggagcctcttattcttgaagaagagcgggagatggaaagggaa
aaagaatatgaagagagtgtggccaaagaagatcaaccaacagttccaggagaaactcaa
ggtgacaattactttactggaaagaaaactattgaaactgtcaaagcagctgaaaggatc
atggaggctattgagctgtaccgagaagagactgcaaaaatgaaagaacacaaagccatt
tgtaaagctgccggaaaagaggtccgtcttcccgtcaaccccatcttaatggcttatgga
aatatctctccatcagcttatgtgttagagattttaaaaggaatcaagtcaagtgaattg
gaagaagctctgcttgtcctgcccttctcatacgttccagacatgcttaagctcttcgat
gagttcatccagctgggcactgatattgaacttctgtgtcgctgcctcttctttctcctc
aggattcactttgggcagatcactagcaaccaaatgcttgtgcccgtgatcgaaaaatta
aaggaaacaacgatttcaaaagtcagccaagttcgggatgttattggcttcaatatggcc
ggtcttgattttctcaggagagaatgtgaagccagaagtgaagttacgttttttgctgat
gctacaagtcatctggaggagaagaagaggaagaggaaaaaaagggagaagttaatctta
actttgacttaa
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