Suncus etruscus (white-toothed pygmy shrew): 125997481
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Entry
125997481 CDS
T09902
Symbol
PHGDH
Name
(RefSeq) LOW QUALITY PROTEIN: D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00260
Glycine, serine and threonine metabolism
setr00270
Cysteine and methionine metabolism
setr01100
Metabolic pathways
setr01200
Carbon metabolism
setr01230
Biosynthesis of amino acids
Module
setr_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125997481 (PHGDH)
00270 Cysteine and methionine metabolism
125997481 (PHGDH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
125997481 (PHGDH)
Enzymes [BR:
setr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
125997481 (PHGDH)
1.1.1.399 2-oxoglutarate reductase
125997481 (PHGDH)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125997481 (PHGDH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
125997481
NCBI-ProteinID:
XP_049621880
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Position
19:complement(3895243..3931921)
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AA seq
533 aa
AA seq
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MAFANLRKVLISDSLDPCCRKILQDGGLQVVERQNLSKEELIAELQDCEGLIVRSATKVT
ADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQ
IPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP
EVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDGTFAQCKKGVRVVNCARGGIV
DEGALLRALQSGHCAGAALDVFTEEPPRNRALVDHENVISCPHLGASTKEAQSRCGEEIA
IQFVDMVKGKSLTGVVMLKLLTSAFSPHTKPWIGLAEALGTLIRSWAGSPKGTIHIVTQG
TSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVQEAGLNVTTSHNPAVPGEQGSGE
GLLTVALADTPYQAVGLVQGTTPVLQALNGAVFRPEVPLRRGLPLLMFRAQSFSPAMLPT
MIGLLAEAGVQLLSYQTSAVSDGATWHVMGISSLLPNLDAWKPNVTEAFQIHF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgcaaatctgcggaaagtgctcatcagtgatagcctggacccatgctgcagg
aagatactgcaagatggagggctgcaagtcgtggagaggcagaacctgagcaaggaagag
ctgatagcagaactgcaggactgtgagggcctcatcgtgcgctcagccaccaaggtgacc
gctgatgtcatcaatgcggcggagaagctgcaagtcgtgggcagggctggcacgggagta
gacaatgtggatttggaggctgctacgaggaagggcatcctggtgatgaacactcccaac
ggaaacagtctcagtgcagctgaactcacctgtgggatgatcatgtgtctggcaaggcag
attccccaggcgacagcatcaatgaaagatggcaagtgggacaggaagaagttcatggga
acagagctgaatggaaagaccttgggaattcttggcctagggagaattgggcgagaggtg
gctacccggatgcagtcctttggaatgaagaccatagggtatgaccccatcatttcccct
gaggtctctgcctcctttggagttcagcagctgcccctggaagagatctggcctctgtgt
gatttcatcacggtacatacgcctctcctgccctccaccacaggtttgttgaatgatggc
acctttgctcagtgcaagaagggggtgcgtgtggtgaactgtgcccggggaggaattgtg
gatgaaggggccttactccgggccctgcagtctggtcactgtgctggagctgctctcgat
gtgttcacagaagaaccacctcggaaccgagccttggtggaccatgagaatgtcatcagc
tgtccccaccttggggccagcaccaaggaagcccagagccgctgtggggaggaaattgcc
atccagttcgtggacatggtgaaggggaaatctctcacgggtgttgtaatgctcaagctc
cttaccagtgctttctctccacacacaaaaccttggattggtctggcagaagcattgggg
accctgatacgatcctgggctgggtcccccaaaggaaccatccacatagtgacacaagga
acatccctgaagaatgcggggaactgtctgagtcctgctgtcattgttggccttttgaaa
gaagcttccaagcaggctgatgtgaacctggtgaacgccaagctgctggtacaggaggcc
ggcctcaatgtcaccacttcgcataaccctgccgtgccaggggagcagggcagtggggaa
ggcctgctcactgtggccctggcagataccccttaccaggcagtgggtttggtgcagggt
actacacccgtgctccaagcgctcaatggagctgtctttagaccagaagtgcctctccgc
cggggcctgccgctgctcatgttccgagctcagtccttcagccctgccatgctgcctacc
atgattggccttcttgcagaggcaggtgtgcagttactatcctaccagacctccgcggtg
tcagatggggccacctggcatgtcatgggcatctcctccctactgcccaacctggatgca
tggaagccgaacgtgacagaggcttttcagattcacttctga
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