Suncus etruscus (white-toothed pygmy shrew): 125997573
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Entry
125997573 CDS
T09902
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04659
Th17 cell differentiation
setr04710
Circadian rhythm
setr05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
125997573 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
125997573 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
125997573 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
125997573 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
setr03310
]
125997573 (RORC)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125997573 (RORC)
Nuclear receptors [BR:
setr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125997573 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125997573
NCBI-ProteinID:
XP_049621957
LinkDB
All DBs
Position
19:complement(1858861..1891912)
Genome browser
AA seq
737 aa
AA seq
DB search
MPCAATGGGEWVNHEAVAWLAPVAVYQLGERLRGGASTSSLLPGPQPAGLLGPCSLPSWA
VRAARTAPRELPMDKTPQRQHQASQELLAAKKTHSCTGVLKKKGTQTLQHQHRHGPTRSQ
RIWAEEEKGSFVPLWPEAIPGQLRAFPQTTERGSCPGIWHLSRKQSRAGLGWEGRSAPLG
LPPPNWQPPLWSLGLQKLRELRKERGHLDGPRAGFPSWELARPGGPTSVCVHPHSRSFSL
AAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQHCNVAYSCTRQQNCPIDRTSRNR
CQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQQQEQVHKTSEAALQGAAP
IACTLGIPDGQMPLGSSPDLPEASACPPGLLRAPSSGTLYAHCLVKAGLSRGPYSPEYSP
ERAKAEARERLYGGGHQLSPETCLPHFEVPRLARHSEAGQSPGSYCSANLHSAPEVPLAS
LTEMEHLVQNVCKSYRETCQLRLEDLLRQRPNLFSREEVAGYQRQSMWEMWERCAHRLTE
AIQYVVEFAKRLTGFMELCQNDQIVLLKAGAMEVVLVRMSRAYNADNHTVFFEGKYGGTE
LFRALGCCELINAIFDFSQSLSALCFSEDEIALYTALVLINANRPGLQEKSKVEQLQYNL
ELAFHHHLFKTHRQGILAKLPPKGQLRSLCSQHVEKLQTFQHLHPIMVQIAFPPLYKELF
STETEAPIACSGDRAME
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgccatgtgcagcaactgggggtggggaatgggtgaatcacgaggccgtggcgtggctg
gctcctgttgctgtttaccagctgggagagagactaagaggaggtgccagcacctcctca
ttgctgcctgggccccagccagctggcctcttggggccctgctccctgccctcctgggca
gtcagggcagcaaggacagcaccccgggagctgcccatggacaagaccccccagagacag
caccaagcttcacaggaactgctggctgcaaagaagacccacagctgtactggggtactg
aagaagaagggaacacagaccctccagcatcagcaccgccatgggccgacaagaagccag
aggatctgggctgaggaggaaaagggaagctttgtgcccctgtggcctgaagccatccca
ggccagctcagggccttcccacagaccacagaaagggggtcctgccctgggatctggcat
ctcagcagaaaacagagccgagctgggctgggctgggagggacgatctgcccctcttggt
ctcccacccccgaactggcagccccccctgtggtctctgggcttgcagaagctgcgggaa
ctgaggaaggagcgagggcacctggacgggcctcgagcgggcttccccagctgggagctg
gccaggcctggaggacccacatccgtgtgcgtgcatcctcactctcgttccttctctctt
gcagcccaaattgaagtgatcccttgcaaaatctgtggagacaagtcgtctgggattcat
tacggggtcatcacttgtgaggggtgcaagggcttcttccgcagaagccagcactgcaac
gtggcctactcctgcacgcgccagcagaattgccccatcgaccgaaccagccgcaaccga
tgccagcattgccgcctgcaaaaatgcctggctctgggcatgtccagggacgctgtcaag
ttcggccgtatgtccaagaagcaaagggacagtctgcatgccgaggtgcagaagcagttg
caacagcaacaagaacaagtgcacaagacttccgaagcagccctccagggagcggccccc
atcgcctgcaccctggggatccccgatggccagatgcccctgggatcttctcctgacctc
cccgaggcctctgcctgtcccccgggcctcctgagggcacccagctctgggactctctac
gcccactgcttggtcaaggccgggctcagtcgaggtccctattcccctgagtacagcccc
gagcgggccaaggcagaggccagggagcgtctgtacggtgggggccaccaactgtccccc
gaaacttgcctgcctcactttgaggtgcccagactggcaaggcacagcgaggcagggcag
agcccggggagctactgcagtgccaacttgcatagtgccccagaggtgccactggcctcc
ttgactgagatggagcacttggtacaaaatgtttgcaagtcctaccgggagacgtgccag
ctgcgcctagaggacctgctgcgacagcgccccaatctcttctccagagaagaagtggcc
ggctaccagaggcagtccatgtgggagatgtgggaacgctgtgcccaccgactcaccgag
gccatccagtacgttgtggagtttgccaagaggctcacgggttttatggaactctgccag
aacgaccagatcgtgttgctcaaagcaggagccatggaagtggtgctggtacgaatgagt
cgagcctacaatgctgataaccacacagtctttttcgaaggcaaatacggtggcacggag
ctgttccgagctttgggttgctgcgagcttatcaatgccatattcgacttctctcagtcc
ctgagtgctttgtgcttctccgaagatgagattgctctctacacagccttagtcctcatc
aatgccaaccgcccaggactccaggagaaaagcaaagtggagcagctgcaatataatctg
gagctggcctttcaccatcacctcttcaagacccatcgccaaggcatcctggcaaagcta
ccacccaaggggcagttgaggagtctgtgcagccagcacgtggagaagctacaaaccttc
cagcaccttcaccccatcatggtccagattgctttcccgccactgtacaaggagctcttc
agcactgagacggaggcccccatagcctgttcgggggaccgagcgatggagtga
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