Suncus etruscus (white-toothed pygmy shrew): 125997608
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Entry
125997608 CDS
T09902
Symbol
TRIM33
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
setr01001
]
125997608 (TRIM33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125997608 (TRIM33)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125997608 (TRIM33)
Protein kinases [BR:
setr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125997608 (TRIM33)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125997608 (TRIM33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4
zf-C3HC4_2
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
125997608
NCBI-ProteinID:
XP_049621984
LinkDB
All DBs
Position
19:9505252..9621721
Genome browser
AA seq
1151 aa
AA seq
DB search
MAEHKGGGGDGAAEVESEGGQGAGPAQEAEPPLAAAITVEEDEEAEDGGEDDGDEFAGAA
ASGASAAASASSASAASPSPGPAAPPGSVPAAAAATATAAAPARSPAPGAAAAAAAAPAP
APPPPRRPRRPPPPPPASAPAAASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCRRCLPE
PERQLSVPVPGGSNGDVQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQV
CTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFC
PVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNY
VHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLL
QQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGA
IRFHCDPTFWAKNVVNLGNLVIESKPTPGYTPNVVVGQVPPGTNHISKTPGQINLAQLRL
QHMQQQVYAQKHQQLQQMRMQQPPASVPTTTTTTQQHPRQATPQMLQQQPPRLISVQTMQ
RGNMNCGAFQAHQMRLAQNAARIPGIPRHSGPQYSLMQPHLQRQHSNPGHAGPFPVVSVH
NTTINPTSPTTATMASANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSL
DNLLSRYISGTHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGS
SGRTAEKTSLSFKSDQVKVKQEPGTEDEVCSFSGAVKQEKTEDGRRSACMLSSPESSLTP
PLSTNLHLESELDALTNLENHVKSEPTEMNESCKQSGLNSLVNGKSPIRSLIHRASRIGG
DGSSKDEDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK
PEVEYDCDNLQHSKKGKTAQGLNPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKI
IKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEMMKVVQVYADTQEINL
KADSEVAQAGKAVALYFEDKLTEIYSDRTFAPLPEFEQEEDDGEVTEDSDEDFIQPRRKR
LKSDERPVHIK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacacaaaggcggcggcggcgacggagccgccgaggtggagagcgaagggggc
caaggcgcggggcccgcgcaggaggcggagccgccgctcgccgccgcgatcaccgtggag
gaggacgaggaggcggaggacggcggcgaggacgacggcgacgagttcgccggcgcggcc
gcctcgggagcctccgccgcggcctcggcgtcgtctgcgtcggcggcgtcgccgtctccg
ggtcctgctgcgccgccgggctccgtccctgcagccgctgctgccacggccacggccgcg
gccccggcccgatcaccggcgccaggagcagcagcagcagcagcagcagcgccagcgccg
gccccgccgccgccccgccgcccccgccggcccccgccgccgccccccgcgtccgccccc
gccgcggcctcgctgctcgacacctgcgccgtgtgccagcagagcctgcagagccggcgc
gaggcggagcccaagctgctgccctgcctgcactccttctgccgccgctgcctgcccgag
cccgagcgccagctcagcgtgcccgtgcccggcggcagcaacggcgacgtgcagcaggtt
ggtgtgatacggtgccctgtatgccgccaagaatgcaggcagatagacctcgtggataat
tactttgtgaaagatacatctgaagccccaagcagttctgatgaaaagtcagaacaggta
tgtactagttgtgaagacaatgcaagtgcagttggcttttgtgtagaatgtggagaatgg
ctctgtaagacttgtattgaagcacaccagagagtaaaattcactaaagatcacttgatc
aggaagaaagaagatgtctcagagtctgttggagcatctggtcagcgccctgttttctgc
cctgtacacaaacaagaacagttgaaacttttctgtgaaacatgtgatagactaacatgt
agagactgccagctattggaacacaaagaacataggtaccagtttttggaagaagcgttt
caaaaccagaaaggtgcaattgagaatctactcgctaagcttcttgagaagaagaactat
gttcattttgctgctactcaggtgcagaataggataaaagaagtaaatgagactaacaaa
cgagtagaacaggaaattaaagtggccattttcacccttatcaatgaaattaataagaaa
ggaaaatctctcttacagcagctagagaatgtgacaaaagagagacaaatgaagttactt
cagcagcagaatgacatcacagggctttctcggcaggtgaagcatgtcatgaattttaca
aactgggcaattgctagtggcagcagtacagcgctgctttacagcaaacgactgatcact
tttcaattgcgccatattctgaaagcacgttgtgatcctgtccctgctgctaatggagcg
atccgtttccattgtgaccccaccttctgggcaaagaatgtagtcaatttaggtaaccta
gtaatagagagtaaaccaactcctggttatactccaaatgttgtagttgggcaagtccca
ccagggacaaaccacattagtaaaactcctggacagattaacttagcccaacttcgactg
cagcacatgcagcaacaagtgtatgcgcagaagcatcagcagttgcaacagatgaggatg
cagcaaccacccgcatctgtgccaacgaccacaactacaacgcagcagcaccctagacaa
gccacccctcagatgctgcagcagcagcctccaagattgatcagtgtacaaacgatgcaa
agagggaacatgaactgtggagctttccaggcacatcagatgagattggctcagaatgct
gcccggataccagggatccccaggcacagtggcccccagtactccttaatgcagccacac
ctccaaagacaacattcaaatccagggcatgctggacccttccctgttgtatcagtgcac
aacacaacgatcaatccaaccagccctacaacagctaccatggcaagtgcaaaccgaggt
cccaccagcccatctgttacagcaatagaacttatcccctcagttaccaatccagaaaac
cttccgtcgttgccagatattccacccattcagttggaagatgctggttctagtagttta
gataatctactaagtagatacatctcaggcactcacctacccccacagcccacaagcacc
atgaatccctccccgggaccctccgccctttctccaggatcatcaggtctctctaattcc
cacacacctgtgagacctcctagtacctcaagtactggtagtcgaggcagctgtggttca
tcaggaagaactgctgagaagacaagtcttagttttaaatcggatcaagtgaaggtcaaa
caagaacccgggactgaggatgaagtttgtagcttttcaggtgctgtgaaacaagaaaag
acggaggatggcagaaggagcgcctgcatgttgagcagccctgagagtagcttgactcca
cctctctcgactaacttacatttagagagtgagttggacgctttgacaaacctggaaaac
catgtgaaaagtgaacccacagaaatgaatgagagctgcaaacagtcgggactcaacagc
cttgttaatggaaaatcccctattcgaagtctcatacacagggcgtcaaggatcggaggg
gacggcagcagtaaggacgaggacccaaatgaagactggtgtgctgtctgccagaacgga
ggggatcttctgtgttgtgaaaaatgcccaaaggtttttcacctaacttgtcatgttcca
acacttcttagttttccaagtggggactggatatgcacgttttgcagagatatcgggaaa
cctgaagtcgaatatgattgtgataatttgcaacatagtaaaaaggggaaaactgcacag
ggattaaacccagtggaccaaaggaaatgtgaacgtcttctgctttacctctattgtcat
gaattaagtattgaattccaggaacctgttcctgcttcgataccaaactactataaaata
ataaagaaaccaatggatttatccacagtgaagaagaagcttcaaaaaaaacattcccaa
cactaccaaatccccgacgactttgtggctgatgtccgtttgatcttcaagaactgtgaa
agatttaatgaaatgatgaaagttgttcaagtttatgcagacacacaagagattaatttg
aaggctgattcagaagtagctcaggcagggaaagcagttgcattgtactttgaagataaa
ctcacagagatctactcagacaggaccttcgcgcctttgccagagtttgagcaggaagag
gatgatggcgaggtaacggaggattctgacgaagactttatacagccccgcagaaaacgc
ctaaagtcagatgaaagaccagtgcatataaagtaa
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integrated database retrieval system
