Suncus etruscus (white-toothed pygmy shrew): 125997615
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Entry
125997615 CDS
T09902
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
125997615 (DDX20)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125997615 (DDX20)
Spliceosome [BR:
setr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
125997615 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
125997615
NCBI-ProteinID:
XP_049621987
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All DBs
Position
19:complement(12665507..12682004)
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AA seq
814 aa
AA seq
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MAALSDTSTAAAPAAAVPGPGLEPVAPRTAHDLGDARARTADVLAEPAGFESLLLSRPVL
AGLRLAGFERPSPVQLQAIPLGRCGLDLIVQAKSGTGKTCVFCTIALDTLILENLCTQIL
ILAPTREIAVQIHSVITSIGIKMEGLECHVFIGGTPLSQDKIKLKKCHIAVGSPGRIKQL
IELEYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPINKQMLAVSATYPESLANAL
TNYMREPTFVRLNSSDPSLIGLKQYYKVVSSYPLAHKIFEEKSQHLLELFSRIPFNQALV
FSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMTKLKQFHCRVLISTDLTSRGID
AERVNLVVNLDVPVDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLL
SLPDPIPSDLMDECLDCDVEVKAATQTCDLTIGPVLPLKKQIQKIERNGLSQKMPGNHLP
TSRNSSTAGLSVKSKNNAKQKLPAKSNSECAVTEKAASPKEPGCVIQLEEQMKTSIQSPP
EDVASQPQLKDGSSVALPKIPCLSSFKIHMPCALSFEELVQDYEHYIKEGFEKPVEIIRH
YTGHGDQTVTPENGFVGERITEERVQILASSSPSGDSESDSDSDSSKTSNQSKGNKAYSE
GFCETRPKETQPTSADGCIAVEHVEHSRLSRNEAPRVAEYQDSPEIQAKARHKEGASQRG
KHSRRNLPRRSSHRLQTEPQEEGWRDGHRDAYQDSADAYQDYEEYWRAYYRAWQEYYAAA
SQSYYWNAQRHPSWMAAYHMNTVYLQEMMRGHQC
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgtcggacacctccacggcggcggctcctgcggcggccgttccgggcccg
ggactcgaacccgtggccccgcggacggcgcacgacctgggcgacgcccgggcccgcacg
gcggacgtgctggcggaaccggcgggcttcgagtcgctgctgctgtcgcggccggtgctg
gcggggctgcgcctggcgggcttcgagcgcccgtcgcccgtgcagctgcaggccatcccg
ctggggcgctgcgggctcgatttaattgtgcaagcaaagtctggcaccgggaaaacctgt
gtattctgcaccattgctttggacactctgattctggaaaacttatgcactcagatcttg
atcttggctcctacaagagaaattgctgtacagatacattccgttatcacaagtatcgga
atcaaaatggaaggcttggagtgccatgtctttatcggagggactccattatcacaggac
aaaataaaacttaaaaagtgtcatatagctgtgggatctcctggcagaattaaacagctg
atagaacttgagtacttgaacccagggagtatccgtctctttattcttgacgaagcggat
aaacttttagaagaaggcagtttccaggagcaaataaattggatttattcttctttgccc
atcaataaacagatgttggcagtatcagctacttaccccgaatctttggcgaatgctttg
accaactatatgagggagcccacgtttgtaagactcaattccagtgatccaagtctgata
ggtttgaagcaatattacaaagttgtcagttcttatcccttggcacataagatttttgag
gaaaagagccagcatctactggagctgtttagcagaattccatttaaccaagctttagtc
ttttccaatttgcacagcagagcacaacatttggctgatatcctttcttccaaaggcttt
cctgctgagtgcatttcgggcaatatgaatcaaaatcaacgccttgatgctatgactaaa
ctgaagcagtttcactgcagagtccttatttccacagatttgacttctcgtgggattgat
gctgaaagggtcaatctagttgtaaatctggatgtacccgtggattgggagacatacatg
catcggattggcagagctggccgttttggtactttgggactgacagtgacctactgttgt
cggggagaggaagaaaatatgatgatgaaaattgcccagaaatgtaatatcaaccttctc
tctttaccagatcccattccttctgatttgatggacgagtgcttggattgtgatgtggag
gtcaaagctgctacccagacatgtgacttaacaattgggcctgtcctgcccctcaaaaag
caaattcaaaagatagagagaaatggcctgagtcagaaaatgcccggcaatcatctacct
acatctagaaatagttcgacagctgggctctcggtcaaatcaaaaaataatgccaaacag
aagctaccagctaaaagtaactcggagtgtgcggtcacagaaaaggcagcgtccccaaaa
gaacctggctgtgtcattcagctggaggagcaaatgaagacttccattcagagcccccct
gaggacgtggctagtcaaccgcagctcaaagacggttcctccgtggcactccccaaaatt
ccttgcctgtcttcctttaaaatccacatgccatgcgctttaagttttgaagagctggtc
caggattacgaacactatattaaggaagggtttgaaaagcctgtggagatcatcaggcac
tacacgggtcacggggatcagacggtgacgcctgagaatggttttgtgggggagagaatc
acggaggagagagtgcagatattggccagcagtagcccgtccggggactcggagagtgac
agcgactctgacagctccaagacctctaaccagagcaaaggaaataaagcgtactcggaa
ggcttttgtgaaacgcggccgaaagagacccagcccacttctgcggatggctgcatcgct
gtggaacatgtggaacattcccgtctgagcaggaatgaagcccctcgagtagcagagtat
caggactcccctgaaatccaagcgaaggcgaggcacaaagagggtgccagccagagaggt
aagcacagccggagaaaccttccgcggcgttcttcccatcgattgcagacggaaccccaa
gaggagggctggcgcgacggccacagggacgcctatcaggactctgctgatgcctatcag
gattatgaggagtactggagagcgtactacagagcatggcaggagtactacgctgctgct
tctcagtcctattactggaatgctcagaggcatcccagttggatggcagcctatcacatg
aacaccgtttatctgcaagaaatgatgcgaggccaccagtgctga
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