Suncus etruscus (white-toothed pygmy shrew): 125997880
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Entry
125997880 CDS
T09902
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05200
Pathways in cancer
setr05222
Small cell lung cancer
setr05223
Non-small cell lung cancer
setr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125997880 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
125997880 (RARB)
05222 Small cell lung cancer
125997880 (RARB)
05223 Non-small cell lung cancer
125997880 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
125997880 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
setr03310
]
125997880 (RARB)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125997880 (RARB)
Nuclear receptors [BR:
setr03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
125997880 (RARB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125997880
NCBI-ProteinID:
XP_049622020
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All DBs
Position
20:complement(15191289..15630670)
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AA seq
455 aa
AA seq
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MTTSSHTCPVPAVNGHMTHYPAAPYPLLFPPVIGGLSLPSLHGLHGHPPPSGCSTPSPAT
IETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
IYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEM
TAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIV
EFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALK
IYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGH
EPLTQSSSGNTAEHSPSISPSSVENSGVGQSPLVQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagtagccacacatgtcctgtcccagcagtgaatggacacatgactcactat
ccagctgctccttacccattactctttccaccagtcattggaggactctctctgccttcc
ctccatggcctacatggtcatcctcctccaagtggatgcagcaccccatcacctgcaacc
attgaaactcagagcaccagctccgaggaactggtcccgagtcctccttcgccacttcct
ccccctcgagtctacaagccgtgcttcgtctgccaggacaaatcatcggggtaccactat
ggggtcagcgcctgtgaggggtgtaagggttttttccgcagaagtattcagaagaacatg
atttacacttgtcatcgagataagaactgtgttattaataaagtcaccaggaatcgatgc
cagtactgtcgactccagaagtgctttgaagtgggaatgtccaaagaatctgtcaggaat
gacaggaacaagaaaaagaaggagccttcaaagcaagaatgcacggaaagctatgaaatg
acagcagagctggacgatctcacagagaagatccgaaaagctcatcaggaaacctttccc
tcgctttgccagctgggtaaatacaccacgaattccagtgctgaccaccgagtccgtctg
gatctgggcctctgggacaaattcagtgagctggccactaagtgcattattaagatcgtg
gagtttgctaaacgcctgccaggtttcaccggcttgaccatcgcagaccaaatcaccctg
ctgaaagccgcctgtctggacatcctgattcttagaatttgtaccagatataccccagaa
caagacaccatgactttttcagatggccttaccctaaatcgaactcagatgcacaatgct
ggatttggtcctctgactgaccttgtgttcacctttgccaaccagctgctgcctttggaa
atggatgacacagaaacaggccttcttagtgctatctgcttaatctgtggagaccgacag
gaccttgaggaacccacaaaagtagacaagctacaagaaccattgctggaagcactgaaa
atttatatccgaaagagacgacctagcaaacctcacatgtttccaaagatcttaatgaaa
atcacagatctccgcagcatcagtgctaaaggtgcagaacgtgtaattaccttgaaaatg
gaaattcctggatcaatgccacctctcattcaggaaatgctggagaattctgaaggacat
gaacctttgacccaaagttcaagtggaaacacagcagagcacagtcccagcatctcaccc
agctcagtggaaaacagtggtgttggccagtcaccactggtccaatga
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