Suncus etruscus (white-toothed pygmy shrew): 125997966
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Entry
125997966 CDS
T09902
Symbol
TBC1D5
Name
(RefSeq) TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125997966 (TBC1D5)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125997966 (TBC1D5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3452
TryThrA_C
PIN-TPR-GreABC
Motif
Other DBs
NCBI-GeneID:
125997966
NCBI-ProteinID:
XP_049622111
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All DBs
Position
20:23042474..23586243
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AA seq
815 aa
AA seq
DB search
MYHTLSETRHPLQPEEQEVGIDPLSSYSNKSGGDSNKNGSTSSPLDSDGTFNSYRKEWEE
LFVNNNYLATIRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISKIKELRAWYNSIKE
IHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQEN
VRKILTDVLFCYARENEQLLYKQGMHELLAPIIFILHCDHQAFLHACESAQPSEDMKALL
NPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKDTLMTPIPFARPQDLGPTIAIVTKV
NQIQDQLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGLS
LSLVDYIFIAMLLYIRDALISSNYQTCLGLLMHYPVIGDVHSLILKALFLRDPKRNPRPV
TYQFHPNLDYYKARGADLMNKSRTNAKGAPLNINKVSNSLINFGRKLISPATVPGSASGP
VPGGTGSGTSTAMGPPRILAEAPRHHLLQQQQQQQQRLMKSESMPVQLNKGDVVTGSDAQ
ASVPVQTLTDLQGQSSKNISSSPSIESLPGGREFTGSPPSSATKKDSFFSNISRSRSQSK
TIGRKESEEELEAQISFLQGQLNDLDAMCKYCAKVMDTHLGNIQDVILQENLEKEDQILV
SLAGLKQIKDILKGSLRFNQSQLEAEENEQITIADDHYCSSGQGQGPREPGACEQASSET
PGLSDRGGAEDFIMVSKEDEPSSARGPLPSQAQPLRTLRNTSGKGEALTRTPLVFSDPLM
GSASASSSNPSSSPDEDSSNNSKDSGFTIVSPLDI
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacacattatcagaaactagacatcctctgcagccagaagaacaagaagtgggc
attgacccattgtcaagttactctaacaagtctggaggagattcaaataaaaatggaagc
acaagttcacctttggattctgatgggacttttaattcctataggaaagaatgggaagaa
ctatttgtaaacaacaattacttggcaacaataaggcagaaggggattaatgggcagctg
agaagcagcaggttccgcagcatttgctggaagctatttctttgtgttcttcctcaagat
aaaagtcaatggataagtaaaattaaagaattaagagcatggtataacagcattaaagaa
attcacatcaccaacccaaggaaggttgttggccagcaagacttaatgatcaacaatccc
ctctcacaggatgaagggagtctttggaacaaattcttccaagacaaagaacttcgatca
atgattgaacaagatgtcaaaagaacgtttcctgaaatgcagtttttccaacaagaaaat
gtgagaaaaattcttacagatgttcttttctgttatgctagagaaaacgagcagttgctt
tataaacagggcatgcatgagctattagctcccatcatctttatcctccactgtgaccac
caagcatttcttcatgcttgtgaatctgcacaaccaagtgaggacatgaaagctcttttg
aaccctgagtatctggagcatgatgcctatgcaatgttctcacaacttatggaaacagca
gaaccttggttttcaacttttgagcatgatggtcaaaaggggaaagacacactgatgact
cccatcccctttgctagaccacaggacttagggccaacaattgctatcgtgactaaagtc
aaccagatccaagatcagctgcttaagaagcatgatatcgagctttacatgcacttgaac
agattggaaattgcaccacagatatatgggttgcggtgggtccggctactctttggacgt
gagttccccctgcaggatctgctggtagtctgggatgccttgtttgcagatggcctcagc
ctgagtttagtcgattatattttcattgccatgttactttacatccgagatgctttgatc
tctagtaactaccagacctgccttggcctgctgatgcattacccagtcattggagatgta
cattcactgattcttaaggctctcttcctgcgtgacccaaagagaaatccaagaccagtg
acgtatcaattccatccaaatttagattattacaaagcacgtggagcagacctaatgaat
aaaagccggacgaatgccaaaggtgcacccctgaatataaataaggtctcaaatagcctg
attaattttggaagaaagttgatctctcctgcaacagtcccaggcagtgccagtggacct
gttcctggaggcactggcagtggcacctcgactgctatgggtccccccagaatcttagca
gaagcccccaggcatcatttgctgcagcagcaacagcagcagcagcagcggttgatgaaa
tcagaaagcatgccagtgcagctgaacaaaggcgatgtagttacaggaagcgatgctcag
gcttctgttcctgtccagactctaactgacctccaaggacaaagttctaaaaacatcagt
tcgtctccaagcattgagagtttgcctggaggaagagaattcactggttctccaccttcc
tctgctacaaagaaagattccttttttagcaacatctctcgttcccgttcacagagcaaa
actataggcagaaaagagtctgaagaggaactagaagcccagatttctttccttcaagga
cagttaaatgacctggatgccatgtgcaaatactgtgcaaaggtgatggacacccatctt
ggaaatattcaggatgtaatattacaagaaaatctggaaaaagaagaccaaattctggtt
tccctggcaggattaaaacagatcaaagacattctgaaaggctccctgcgtttcaaccag
agccagctggaagccgaggagaatgagcagatcaccattgccgacgaccactattgctcc
agcggccaaggccagggtcctcgcgagcctggggcctgtgaacaggcctcttcagaaaca
ccagggctcagcgaccgcggaggcgcagaagacttcatcatggtctccaaagaggacgag
ccgagcagtgccaggggacccttgcctagccaggcccagcctcttcgcaccctcaggaac
acatccggcaaaggcgaggccctgacccgcacccctctggtgttctctgatccactgatg
ggttctgcctcagcttcctctagcaaccccagctccagcccagatgaggacagcagcaac
aatagcaaagactctggcttcaccatcgtgagccccctggacatctga
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