KEGG   Suncus etruscus (white-toothed pygmy shrew): 125997966
Entry
125997966         CDS       T09902                                 
Symbol
TBC1D5
Name
(RefSeq) TBC1 domain family member 5
  KO
K18469  TBC1 domain family member 5
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:setr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:setr04131]
    125997966 (TBC1D5)
Membrane trafficking [BR:setr04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    125997966 (TBC1D5)
SSDB
Motif
Pfam: RabGAP-TBC RabGap-TBC_2 DUF3452 TryThrA_C PIN-TPR-GreABC
Other DBs
NCBI-GeneID: 125997966
NCBI-ProteinID: XP_049622111
LinkDB
Position
20:23042474..23586243
AA seq 815 aa
MYHTLSETRHPLQPEEQEVGIDPLSSYSNKSGGDSNKNGSTSSPLDSDGTFNSYRKEWEE
LFVNNNYLATIRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISKIKELRAWYNSIKE
IHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQEN
VRKILTDVLFCYARENEQLLYKQGMHELLAPIIFILHCDHQAFLHACESAQPSEDMKALL
NPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKDTLMTPIPFARPQDLGPTIAIVTKV
NQIQDQLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGLS
LSLVDYIFIAMLLYIRDALISSNYQTCLGLLMHYPVIGDVHSLILKALFLRDPKRNPRPV
TYQFHPNLDYYKARGADLMNKSRTNAKGAPLNINKVSNSLINFGRKLISPATVPGSASGP
VPGGTGSGTSTAMGPPRILAEAPRHHLLQQQQQQQQRLMKSESMPVQLNKGDVVTGSDAQ
ASVPVQTLTDLQGQSSKNISSSPSIESLPGGREFTGSPPSSATKKDSFFSNISRSRSQSK
TIGRKESEEELEAQISFLQGQLNDLDAMCKYCAKVMDTHLGNIQDVILQENLEKEDQILV
SLAGLKQIKDILKGSLRFNQSQLEAEENEQITIADDHYCSSGQGQGPREPGACEQASSET
PGLSDRGGAEDFIMVSKEDEPSSARGPLPSQAQPLRTLRNTSGKGEALTRTPLVFSDPLM
GSASASSSNPSSSPDEDSSNNSKDSGFTIVSPLDI
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtatcacacattatcagaaactagacatcctctgcagccagaagaacaagaagtgggc
attgacccattgtcaagttactctaacaagtctggaggagattcaaataaaaatggaagc
acaagttcacctttggattctgatgggacttttaattcctataggaaagaatgggaagaa
ctatttgtaaacaacaattacttggcaacaataaggcagaaggggattaatgggcagctg
agaagcagcaggttccgcagcatttgctggaagctatttctttgtgttcttcctcaagat
aaaagtcaatggataagtaaaattaaagaattaagagcatggtataacagcattaaagaa
attcacatcaccaacccaaggaaggttgttggccagcaagacttaatgatcaacaatccc
ctctcacaggatgaagggagtctttggaacaaattcttccaagacaaagaacttcgatca
atgattgaacaagatgtcaaaagaacgtttcctgaaatgcagtttttccaacaagaaaat
gtgagaaaaattcttacagatgttcttttctgttatgctagagaaaacgagcagttgctt
tataaacagggcatgcatgagctattagctcccatcatctttatcctccactgtgaccac
caagcatttcttcatgcttgtgaatctgcacaaccaagtgaggacatgaaagctcttttg
aaccctgagtatctggagcatgatgcctatgcaatgttctcacaacttatggaaacagca
gaaccttggttttcaacttttgagcatgatggtcaaaaggggaaagacacactgatgact
cccatcccctttgctagaccacaggacttagggccaacaattgctatcgtgactaaagtc
aaccagatccaagatcagctgcttaagaagcatgatatcgagctttacatgcacttgaac
agattggaaattgcaccacagatatatgggttgcggtgggtccggctactctttggacgt
gagttccccctgcaggatctgctggtagtctgggatgccttgtttgcagatggcctcagc
ctgagtttagtcgattatattttcattgccatgttactttacatccgagatgctttgatc
tctagtaactaccagacctgccttggcctgctgatgcattacccagtcattggagatgta
cattcactgattcttaaggctctcttcctgcgtgacccaaagagaaatccaagaccagtg
acgtatcaattccatccaaatttagattattacaaagcacgtggagcagacctaatgaat
aaaagccggacgaatgccaaaggtgcacccctgaatataaataaggtctcaaatagcctg
attaattttggaagaaagttgatctctcctgcaacagtcccaggcagtgccagtggacct
gttcctggaggcactggcagtggcacctcgactgctatgggtccccccagaatcttagca
gaagcccccaggcatcatttgctgcagcagcaacagcagcagcagcagcggttgatgaaa
tcagaaagcatgccagtgcagctgaacaaaggcgatgtagttacaggaagcgatgctcag
gcttctgttcctgtccagactctaactgacctccaaggacaaagttctaaaaacatcagt
tcgtctccaagcattgagagtttgcctggaggaagagaattcactggttctccaccttcc
tctgctacaaagaaagattccttttttagcaacatctctcgttcccgttcacagagcaaa
actataggcagaaaagagtctgaagaggaactagaagcccagatttctttccttcaagga
cagttaaatgacctggatgccatgtgcaaatactgtgcaaaggtgatggacacccatctt
ggaaatattcaggatgtaatattacaagaaaatctggaaaaagaagaccaaattctggtt
tccctggcaggattaaaacagatcaaagacattctgaaaggctccctgcgtttcaaccag
agccagctggaagccgaggagaatgagcagatcaccattgccgacgaccactattgctcc
agcggccaaggccagggtcctcgcgagcctggggcctgtgaacaggcctcttcagaaaca
ccagggctcagcgaccgcggaggcgcagaagacttcatcatggtctccaaagaggacgag
ccgagcagtgccaggggacccttgcctagccaggcccagcctcttcgcaccctcaggaac
acatccggcaaaggcgaggccctgacccgcacccctctggtgttctctgatccactgatg
ggttctgcctcagcttcctctagcaaccccagctccagcccagatgaggacagcagcaac
aatagcaaagactctggcttcaccatcgtgagccccctggacatctga

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