KEGG   Suncus etruscus (white-toothed pygmy shrew): 125997993
Entry
125997993         CDS       T09902                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04710  Circadian rhythm
setr04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:setr00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    125997993 (PER1)
   04713 Circadian entrainment
    125997993 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setr03400]
    125997993 (PER1)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125997993 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 125997993
NCBI-ProteinID: XP_049622141
LinkDB
Position
20:43153119..43163420
AA seq 1269 aa
MSSSQEGADGVGDPRTREPFCSGGTPSPGPPQHRPCPDPNLADDMDANSNGSSGNESNGP
ESRGASQRSSHSSNGKDSALLETTESNKSTNSQSPSPPSSSIAYSLLSASSEQDNPSTSG
CSSEQSARARTQKELMTALRELKRRLPPERRGKGRSGTLATLQYALACVKQVQANQEYYQ
QWSLEEGEPCSMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLR
CKRDVFRGACFSEFLAPQDVGIFYSSTAPSRLPTWGAGASAGSGVKDFTQEKSVFCRIRG
GPDREPGLRYQPFRLIPYVTKIRALDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIFTTR
HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHS
PIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPTPSPALSLD
PDIQELSEQIHRLLLQPVHSPSSTGLCGVGPVTSPGPLLSPGSSSESNGGDAEGPGPPAP
VTFQQICKDVHLVKHQGQQVFIESRTRPLTRPRIPSVVKAKTFPCQSPDPELEAAPASIQ
APLAAVPEEAERKEASSCSYQQINCLDSILRYLESCSIPGTTKRKCASSSSCTASSASDD
DKQRTGPVPVGAKKDPASAVLSGEGATPRKEPVVGGTLSPLALANKAESVVSITSQCSFS
STIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPTVAPDPVPDAYRPVGLTKAVLSLHTQK
EEQAFLSRFRDLGRLRGLDGSSVAPSAPGCHHGPAPSGRRHHCRSKAKRSRHHQTPRTEA
PCYVSHPSTVPSSAPWAPPPATPPFPAVVQSYPLPVFSPRGGAQPLPPSPTSMPSTAFPA
PLVTPMVALVLPNYLFPAPSSYPCGVPQTPAEGPATPVSPSPSPSLPPMPPSPTQRPEAP
LFNSRCSSPLQLNLLQLEETPRVEGGTVAGGSGDSAGPPPPTEEAAEPETRLVEVTESSN
QDALSGSSDLLELLLQEDSRSGTGSASGSLGPGSGSGSQEGGSTSASMTRSSQSSRTSKY
FGSIDSSEAEAGAAQGRVEPGDQVIKYVLQDPIWLLMANADQQVMMTYQVPSRDMASVLK
KDREQLRAMQKQQPRFSEDQRRELGAVHSWVWKGQLPRALDVMACVDCGSNTQDRGHHED
PLFSELDELGLEPMEEGAGEGGGSGAGGDETRSQAGAGLLRSQDLAMEEEEQGGSSSSRA
LTATENGAS
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgagtagctcccaagaaggggcggacggggtaggggaccccaggaccagggaacccttt
tgttccggagggaccccatcccctgggcctcctcagcaccggccttgcccagaccccaac
ctagctgatgacatggatgccaacagcaatggctcaagtggcaatgagtcgaatgggcca
gagtccaggggtgcgtctcagcggagctcgcatagctccaacggcaaggactcagccctg
ctggagaccacagagagcaacaagagtacaaactctcagagcccgtccccaccaagcagt
tccattgcctacagcctcctgagtgccagctcagagcaggacaacccatcgaccagtggc
tgcagcagtgagcagtcagcccgggcgaggacccagaaggaactcatgacggcacttcgg
gagctcaaacgtcgactgcctccggagcgccggggcaagggccgctctgggactctggcc
acgctgcagtatgctctggcctgtgtcaagcaggtgcaggccaaccaggaatactaccaa
cagtggagcctggaggagggggagccttgttccatggatatgtccacctatactctggag
gagctggagcatatcacatctgagtacacgcttcgcaaccaggataccttctccgtggcg
gtctccttcctgacgggccgaattgtctacatttctgagcaagcaggcgtcctgctgcgc
tgcaagcgggatgtgttccgtggtgcctgcttctcagaattcctggctccccaggatgtg
gggatcttctatagttccactgctccatcccgtctgcctacttggggtgccggggcttca
gcaggttcaggcgtcaaggacttcacccaggagaagtctgtcttctgccgtattcgagga
ggtcctgaccgggaaccaggacttcggtaccagccattccgcctaattccgtatgtcacc
aagattcgggccttggatggggcccctgctcagccatgctgcctgcttattgcagagcgc
atccattcgggttatgaagctccccggatccctcctgacaagagaattttcaccacacga
cacactcccagctgcctcttccaggatgtggatgaaagggctgccccgctgctgggttat
ctccctcaggacctcttgggagcgcctgtgctcttgttcctgcatccggaggaccgaccc
cttatgttggccatccacaagaagatcctgcagctggcgggccagccttttgaccactct
cctattcgcttctgtgcccgcaatggagagtatgtcaccatggacaccagctgggctggc
tttgtgcacccctggagtcgcaaggtagcctttgttttaggccgccacaaagtgcgcacg
gcacctctgaatgaggacgtgttcactcccccgacccccagtccggccttgtctcttgac
cctgatatccaggaactctctgagcagatccatcggttactgttacagcccgtgcacagc
cccagttccacagggctctgcggagtcggccctgtgacttctccaggtcctctcctcagc
cctggctcctccagcgagagcaacgggggagatgccgagggacctggccctcctgcccca
gtgactttccagcagatctgtaaggatgtccatctggtgaagcaccagggccagcaggtc
ttcattgagtcccgcacccggccgctgacccggccccgcatccctagtgtggtcaaggct
aagacttttccctgccagtccccagacccagagttggaggctgcgcctgcttcaatccag
gcccctttagctgcagtccccgaggaggctgagaggaaggaagcctccagttgttcctac
caacagatcaactgcctggacagcattcttaggtacctagagagctgcagcatccccggc
acgaccaagcgtaaatgtgcctcctcttcctcctgtactgcatcctcagcttctgacgac
gataagcagaggacaggtccagtccctgtgggcgccaagaaagatccagcatcagcggtg
ctgtctggggagggggctactcctcggaaggagcctgtagtgggaggcaccttgagccca
ctcgccctggccaataaggcagagagcgtggtgtccatcaccagtcagtgtagcttcagc
tccaccatcgtccatgtgggagacaagaagcccccggagtcggatatcatcatgatggag
gacctgcctggactggcgccaggcccagcccccagccctacagtagcccctgatcccgtc
ccagatgcttaccgcccagtgggcttgaccaaggcagtgctgtctctgcacacgcagaag
gaggagcaggccttcctcagccgcttccgtgaccttggtaggctgcgtggactcgacggc
tcctccgtggctccctcggcccctggctgccaccatggccctgcaccctctggccgccgc
caccactgccgatccaaagccaagcgctcacgccaccaccagactccccggacggaagcc
ccctgctacgtctcccacccctcaactgtgccatcctctgctccctgggccccaccacca
gccactcctcccttcccagctgtggtccagtcctaccctctcccagtgttctctccacga
ggaggcgcccagcctctccccccttcccctacatctatgccctcaaccgctttccctgcc
cccctggtaactccaatggtggccttggtactccctaattatctcttccctgctccatcc
agttatccctgtggagtgccccaaactcctgctgagggtcctgctactcctgtctcccct
tctccttccccttctctgccccccatgccccccagccctacccagcgcccagaagctcca
ctgttcaattcgagatgtagctccccacttcaattaaatctgctacagcttgaggagacc
cctcgagttgaggggggtacagttgcagggggctctggggacagtgctgggcccccgcct
cccactgaggaggctgctgagccagagaccagactggtggaggtgaccgagtcctccaac
caggacgcactttcaggctccagtgacctgctggagttgctgctgcaggaggactctcgc
tcgggcacaggctccgcctcaggttccttgggccctggctctggttctggctcgcaggag
gggggcagcacctcagccagcatgactcgtagcagtcagagcagccgcacaagcaagtac
ttcggcagcatcgactcttcggaggcggaggccggagctgcccagggccgggttgagcct
ggggaccaggtcatcaagtacgtgctccaggaccccatctggctgctcatggccaacgcg
gaccagcaagtcatgatgacctaccaggtaccctccagggacatggcatctgtgctgaag
aaggatcgggaacagctccgggcgatgcagaagcagcagcctcggttctcagaggaccag
cgaagagagctgggcgccgtgcactcctgggtctggaagggccagctgcctcgggctctt
gatgtgatggcctgcgtggactgtggcagcaacacccaagaccgaggccaccacgaagac
ccactcttctcggagctggatgaactggggctggagccgatggaggagggagcgggcgag
ggtggtggctctggggcgggtggcgatgagacccgaagccaagctggggccgggctcttg
cgctcccaggacttggccatggaggaggaggaacaaggtgggagctcctccagtcgagcc
ttaactgccacagaaaacggcgcaagctaa

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