Suncus etruscus (white-toothed pygmy shrew): 125998009
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Entry
125998009 CDS
T09902
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125998009 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
125998009 (XRCC4)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125998009 (XRCC4)
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
TPX2
GIY_YIG_2
Motif
Other DBs
NCBI-GeneID:
125998009
NCBI-ProteinID:
XP_049622170
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Position
2:139743221..139958341
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AA seq
330 aa
AA seq
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MEKKVRRIRFASEPNITHFLQVTWEKTLGSGFVITLTDGQSAWTGTVSESEISQEAEDMA
MEKEKYVEELRKALVSQAEPVDTYKFNFSKEFGHFSFEKNLKDVSFRLGSFNVENVASPA
DVIREIICDCLDTIAENQAKNEHLQKENERLLRDWNDVQSRFEKCVNAKETVENDLYTKF
ILVLNEKKAKIRSLRKRLSEIQELGEKIEHKSETDTCAEMSADKDAVYDESTDEECENVP
DAPLLTSGLSDDSIILSPDVTDIAPNRKRRQRMLKNLGTEPKISSQEQQLYEKEKLDTSV
PETSKKHNSNENLSLETLKNTSSEDLFDEI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagtaaggaggatccgttttgcatctgaacccaacatcactcatttccta
caagtcacttgggaaaaaacactaggatctggttttgtcattacactcactgatggccag
tcagcttggactgggacagtttccgaatcagagatttcccaagaagccgaggacatggcg
atggaaaaagagaaatatgttgaagaactgagaaaagcattagtgtcacaagcagaacca
gttgacacatacaagtttaatttttctaaagagtttggtcatttctcctttgagaaaaac
ctgaaagatgtttcattcagacttggttccttcaacgtagaaaatgttgcaagcccagct
gatgtcattagagaaattatttgtgattgcctggacactattgcagaaaatcaagccaaa
aatgagcacctgcagaaagaaaatgaaaggcttctgagagattggaatgatgttcagagt
cgatttgaaaaatgtgtgaatgctaaggaaactgtggagaatgatctttatacaaaattt
attcttgtactaaatgagaagaaagccaaaatcagaagcttacgtaaaaggttaagtgaa
attcaagaattaggagagaagattgaacataaaagtgaaactgatacatgtgctgaaatg
agtgcagataaggatgcagtttatgatgaaagcactgatgaggaatgtgaaaacgtgccg
gatgcccctctgttgacatcaggtctaagtgatgattccattattttaagtcctgatgtc
actgatattgcaccaaatagaaaaaggaggcagcgaatgctaaaaaaccttggaacagaa
ccaaaaatatcctctcaagagcaacaactttatgaaaaagaaaagcttgatacttcagta
cctgagacatcgaaaaagcacaactcaaatgaaaacctgtctctagaaaccctgaaaaac
accagttcagaagacctctttgatgagatttaa
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