Suncus etruscus (white-toothed pygmy shrew): 125998053
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Entry
125998053 CDS
T09902
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125998053 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
125998053 (MBD4)
03400 DNA repair and recombination proteins [BR:
setr03400
]
125998053 (MBD4)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125998053 (MBD4)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125998053 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
125998053
NCBI-ProteinID:
XP_049622242
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All DBs
Position
20:32644717..32656338
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AA seq
511 aa
AA seq
DB search
MENSSECGPLQQALVAPGLLGGTAEIEPPKPVPSGWERVVKQRLSGKTAGRYDVYFISPQ
GLKFRSKRSLADYLLKVGETSLTKEDFDFTAFSKRSRKPRCEDYQEVPTPQLENERNNSN
WSLRTQSSGKKDEFFLPSGSLELQKSKKLSHCASSADLLVGENESMPDVVSGKVRKAKGR
VTRCRKNVSESVQSKRERAPGNNNTNVQSGLVFPESHPDRTCHVSDTRANKPILSVTSAK
RRVKKATSLSAGPNFLPDQITSDIISNLDPARGQEGTEKCENTLLESKEIRMKVDVGGRK
EDLHIDCLKPGSEMDDSCSQTKKESSVKIVKEDVVPRTQIEKRKTSLYFSSKYTKEALSP
PRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAE
VARTADWREVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFC
VNEWKQVHPKDHKLNKYHDWLWENHEKLSLC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtagtgaatgtggtcctcttcagcaggcacttgttgctcctggcctgctt
ggtggaactgcagaaatagaaccccctaaacctgttccctctggatgggaaagagtggtg
aagcaaaggttatctgggaaaacagctggaagatatgatgtgtattttatcagcccacag
ggattgaagttcagatccaaacgttcactcgctgattatcttctcaaagtgggagagacc
tctcttaccaaagaagattttgattttactgccttttccaagaggagccgcaagcccaga
tgtgaagactaccaggaggttccgacaccccaattggaaaacgaaaggaataattcaaac
tggagcctcagaacccaaagcagcgggaaaaaagatgaattttttctgccaagtggtagt
ttggaattgcagaaaagcaaaaaactgtcccactgtgcttcttctgctgatttgcttgta
ggagaaaatgaaagtatgcctgatgttgtttctggaaaggttagaaaggctaaaggaagg
gtgactcggtgcaggaagaatgtttcagagtctgttcaaagtaaaagagaaagagcacct
gggaataataacacaaatgtgcaaagtgggcttgttttcccagaaagtcaccctgatcga
acttgccacgtatctgacaccagagccaacaagccaatcctctcagtgaccagtgcaaaa
aggagagttaaaaaggcaacatcattgagtgcaggaccgaattttctacctgaccaaata
acttctgacatcataagcaatttagatccagccagaggacaagaaggaactgagaagtgt
gagaataccttattagaatcaaaggaaataagaatgaaagtagacgttgggggaaggaag
gaggatttgcatattgactgtttaaaacctggttctgaaatggatgacagctgctcgcaa
actaagaaagaatcttctgtcaaaatagttaaagaggatgtggttccccggacacagata
gaaaaaagaaaaacaagcctgtatttttccagcaaatacaccaaagaagctcttagcccc
cctcgacgcaaagcgttcaagaagtggacgcctcctcgatcaccttttaacctcgtccaa
gaaacactatttcatgatccgtggaagctcctaattgcgactatatttctcaatcggacc
tcagggaaaatggcaatccctgttctttgggagtttctggaaaaatatccttcagctgag
gtagcaagaaccgcggactggagagaagtgtcagaacttcttaaaccacttggtctctac
gatcttcgagcaaaaaccataatcaaattctcagatgaatatctgacaaagcaatggcgg
tatcctatcgagcttcatggtattggcaaatatggcaacgactcctaccgaattttctgc
gtcaatgagtggaagcaggtacaccctaaagaccacaagttaaataaatatcatgactgg
ctttgggaaaatcatgaaaaattaagtctgtgttga
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