Suncus etruscus (white-toothed pygmy shrew): 125998172
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Entry
125998172 CDS
T09902
Symbol
MLH1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr01524
Platinum drug resistance
setr03430
Mismatch repair
setr03460
Fanconi anemia pathway
setr05200
Pathways in cancer
setr05210
Colorectal cancer
setr05213
Endometrial cancer
setr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125998172 (MLH1)
03460 Fanconi anemia pathway
125998172 (MLH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125998172 (MLH1)
09162 Cancer: specific types
05210 Colorectal cancer
125998172 (MLH1)
05226 Gastric cancer
125998172 (MLH1)
05213 Endometrial cancer
125998172 (MLH1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
125998172 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
125998172 (MLH1)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125998172 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125998172
NCBI-ProteinID:
XP_049622410
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Position
20:complement(3521423..3561349)
Genome browser
AA seq
745 aa
AA seq
DB search
MSLVAGVIXRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKWIQ
IQDNGTGIRKEDLDIVCERFTTSKLQSFEDLTKISTYGFRGEALASISHVAHVTITTKTA
DAKCAYRANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVV
GRYSIHNSGISFSVKKQGETVADVRTLPGASTVDNIRSIFGNAVSRELIEVECDDKTLGF
KMKGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEINL
QNVDVNVHPTKHEVHFLHEDSILEQVQRHIDGKLLGSNSSRTYFTQTLLPGLSGPSGEVT
KSATGVTPGSGDKVYAYQMVHTDSREQKLDAFLQPLNKTPPAPPKALSPEDELVVVGGSA
RQQDEEMLELPTTPDKAATKETLGKLEKRGPPSSPDNPRKRQREGSDVEMVEDDSRKEMT
AACTPRRRIINLTSVLSLQEEINQRGHETLREMLNNHSFVGCVTPQWALVQHQTKLYLLN
TTRLSEELFYQILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGWTEEDGPKEGLAEYI
VEFLKKKAEMLADYFSLEIDEEGNLTGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEKD
CFESLSKECAMFYSIRKQYMSEESTLSGLQNEVSGSTTNPWKWTVEHIVYKAFRSHLLPC
KHFTEDGTILQLANLPDLYKVFERC
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtcgccggagttatcnctcggctggatgaggccgtggtgaatcgcatcgcg
gcgggggaagtgattcagcgcccagccaatgcgatcaaggagatgatagagaattgttta
gatgccaaatccacaagtatccaagtagtggttaaagaaggaggcctgaagtggattcag
atccaagacaacggcactgggatcaggaaagaagacctggatattgtgtgtgagcgattc
actacaagtaaactgcagtcctttgaggatttaactaaaatttctacgtatggctttcgt
ggtgaggctttggctagcataagccatgtggctcatgttactattacgaccaaaacagct
gatgcaaagtgtgcatacagagcgaattactcagatggaaaactgaaagctcctcccaaa
ccatgtgcaggcaatcaaggaacccagatcacggtggaagatcttttctacaacatatcc
acgaggagaaaagctttgaaaaatccaagtgaagagtatgggaaaattttggaagttgtt
ggcaggtattcaatacacaactcaggcattagtttttctgttaagaaacaaggtgaaaca
gtagctgatgttcgaacactgcctggtgcttcaactgttgacaatattcgctccatcttt
ggaaatgctgttagtcgagaattgatagaagttgagtgtgatgataaaacccttggcttc
aaaatgaaggggtacatttccaatgcaaactactcagtgaagaaatgtatcttcttactc
ttcatcaatcatcgcctggtagagtcaacttccttaagaaaagccatagaaactgtttat
gctgcctatttgcccaaaaacacacacccattcctgtacctcagtttagaaatcaacctc
cagaatgtggatgtcaacgtacaccccaccaagcacgaagttcactttctgcatgaggac
agtattctggagcaggtgcagcgccacatcgatggcaagctcctgggatccaactcctcc
cgcacgtacttcactcagactttactaccaggtctctctggcccctctggggaggtgacg
aaatctgccacaggtgtgacccctggaagtggtgacaaggtctatgcctatcagatggtt
cacacagactctcgggaacagaagctcgatgcctttctccagcccttgaacaagacccca
cccgctccgccgaaggccttgagcccagaagatgagctggttgttgttggtggcagtgcc
aggcagcaagacgaggaaatgcttgaactccccaccactcctgacaaggctgccacaaag
gagaccttgggaaaattagagaaacgaggtcccccttctagtccagacaatcccagaaaa
agacagcgggaaggctctgatgtggaaatggtggaagatgattccagaaaggaaatgact
gcagcttgtaccccccggagaaggatcattaacctcaccagtgttctgagtctccaggaa
gaaataaatcagcggggacatgagaccctcagagagatgctgaacaaccactcatttgtg
ggctgtgtgactcctcagtgggccttggtacagcatcagaccaagttataccttctcaac
accaccagacttagtgaagaactgttctaccagatactcatttatgattttgccaatttt
ggtgttctaaggttatcggagcctgcgccactcttcgatcttgctatgctggccttggac
agtcctgagagtggctggacagaggaagatggccccaaagaaggccttgccgagtacatt
gtcgagtttctcaagaaaaaggctgagatgctggcagactatttctccctcgaaattgat
gaggaaggaaacctgaccggattaccacttctgatcgacagttatgtcccccctctggag
ggcctgcctatcttcatcttgcggctagccactgaggtgaattgggatgaagaaaaggac
tgttttgaaagcctcagtaaagaatgtgctatgttttattccatccggaagcagtacatg
tctgaggagtccactctctcaggcctgcagaacgaagtgtctggttcgacaacaaaccca
tggaaatggactgtggaacacatcgtctataaagccttccgctcgcaccttctgccttgt
aaacacttcacggaagatgggaccattctgcagcttgctaacctgcctgacctctacaaa
gtctttgagcggtgttaa
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