Suncus etruscus (white-toothed pygmy shrew): 125998203
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Entry
125998203 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125998203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125998203
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125998203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
125998203
NCBI-ProteinID:
XP_049622430
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All DBs
Position
20:complement(7879108..7916194)
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AA seq
714 aa
AA seq
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MGRGEEGLGGVACRRSRLEAGRRGDEPAGGGARRCFRGRDLGKRQRGAGRGGGGHESVLE
DGGVDCVGGTGLPQPANQPVGLRPEMTPGRKRGGGRSSRCVARRRVSRLLSGADAAARPT
DDPRAPRRRRLQTGEQVRPDLATHREVDRCYEAQGPNAPTLVETFGCSSRSPPDPWKGAE
EVKDSRPAGRFRPSVHSAVEEMDGLDDVENSMLYYNQAVXLYHLRQYTEAISVGEKLYQF
IEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMVSQGNNNKNGKNEDGNNSNKD
GSNHKTEGXSLIEVAKSKIHQYKVRAYIQMKSLKACKREVKSVMNTAGNSAPSLFLKSNF
EYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKA
LQENDNVCAQLIAGSSDPDKKFSGRPMCTLLTNKRYELLYNCGIQLLHVGRPLAAFECLI
EAVQVHANPRLWLRLAECCIAANKGTSEQETKGVPSKKGIVQSIVGQGYHHKIVLASQSI
QNTVYNDGQSSAILVASMEFAAICLRNALLLLPEEQQDSKQENGSKNSNPLSGNPESSES
SETSSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNXMALNHADKLL
QQPKVSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNDQEQG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggggcggggcgaggaggggctcgggggcgtggcttgccgaaggagccggctggaggcg
gggcgaagaggagacgaaccggcaggaggcggggcgagaagatgcttcagggggcgtgac
ttaggaaagaggcagagaggggcggggcgaggagggggcgggcacgaaagcgtcctggaa
gacgggggcgtggactgcgtgggcgggacgggcctgccgcagccagccaatcagccggtc
ggtttgcgcccggaaatgactccggggcggaagcggggcggtggaaggtcctcgaggtgc
gttgctaggcgacgggtcagtaggttactttcgggggccgacgccgccgcgcgcccaacg
gacgatccgcgagcccctcgccgaagacggctgcagacaggcgagcaggtgaggcccgac
ctagctacgcaccgtgaggtagatcgttgttatgaagcccaaggtccaaacgcccccacc
ctggtggagacctttgggtgctcctcaagatctccgccggacccgtggaagggagctgaa
gaggttaaggactcgaggcccgcgggccgttttcggccctccgtccactcagctgtcgaa
gaaatggatggcttagatgatgttgaaaacagcatgttgtattacaatcaagcagtcntt
ctttaccatctgcgacaatatacagaagcaatatcagttggtgaaaaactttatcaattc
atagaaccttttgaagaaaaattcgcccaagcggtctgttttttgcttgtagacttgtac
atactaacctatcaggctgagaaagctttacatcttctggctgtcctagagaaaatggtt
tcacagggtaataataacaaaaatggaaagaacgaagatggtaataatagcaacaaagat
ggatctaatcataaaactgaaggtnggagcttaatagaagtagcaaagtccaagatacat
cagtataaagtgagagcttatatccagatgaagtccctaaaagcctgcaaaagagaggtg
aaatcggtcatgaacacagctggaaattctgcgccctctctgtttcttaagagcaatttt
gagtacttaagaggcaattatcgaaaagctgtaaagctgttaaacagttcaaacattgct
gagcatccaggattcatgaaaacaggtgaatgtttaaggtgcatgttttggaataatctg
ggttgcattcattttgccatgagcaagcacaatttggggattttctactttaaaaaggct
ctacaagaaaatgataatgtctgtgcacagcttattgcaggcagtagtgatccagacaag
aagttttcaggacgacccatgtgcacgttactgaccaacaagaggtatgagttgttgtat
aactgcggaattcagctgctgcacgtcgggaggccactggctgccttcgaatgtctgatt
gaagctgttcaggttcacgcaaatcctcgcctctggctccggctggctgagtgctgcatt
gccgccaataaggggacttctgaacaagaaacaaaaggtgttcccagcaagaaaggaatc
gtacagtcgattgttggtcaaggttatcatcataagatagtgttggcatcacagtccata
cagaataccgtttataatgacggacaatcttcagcaattcttgtagccagtatggagttt
gcagctatttgtctcagaaatgccttattgttgttgcctgaagaacaacaggattcaaaa
caggaaaatggatccaaaaatagtaatccattaagtggaaaccctgaaagcagtgaaagc
agtgaaacgagcagcagtaagagtcacgatggagataaatttatcccagctccaccgtct
tctcctttgagaaaacaagaactcgaaaatctaaaatgctccatcctagcctgtagtgct
tacgtggctctggctttgggtgataacnctatggctttgaatcacgcagataaacttctt
cagcaacccaaggtatcaggatctcttaagtttctgggccatttgtatgctgcagaagcc
ctcatctctctggacagaatatctgatgccattactcacttgaatccagaaaacgtcact
gatgtctccttagggatctcttccaatgatcaggaacaaggttaa
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