Suncus etruscus (white-toothed pygmy shrew): 125998221
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Entry
125998221 CDS
T09902
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
setr03037
]
125998221 (NPHP3)
Cilium and associated proteins [BR:
setr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
125998221 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
NPHP3_N
TPR_3
NACHT
TPR_11
AAA_22
KAP_NTPase
AAA_16
ANAPC3
DUF2225
AAA_19
Viral_helicase1
AAA_14
ARM_TT21_4th
14-3-3
Uso1_p115_C
T2SSE
TPR-S
FliD_C
Motif
Other DBs
NCBI-GeneID:
125998221
NCBI-ProteinID:
XP_049622446
LinkDB
All DBs
Position
20:complement(27533965..27567401)
Genome browser
AA seq
1321 aa
AA seq
DB search
MGTASSLVPPAAGGGGEVIEDTYGAGGGEACEIPVEVKPKARLLRGSLRRAAGLTGGQLQ
VGASFRSTGSAGPELECAAAEYERLKKEYDIFRVSKNQELLAMGRREAKLDSENKRLRAE
LQALQKTYQKILREKESALEAKYQAMERASTFEHDRDKVKRQFKIFRETKENEIQDLLRA
KRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTATGTHCEYWTGGALGSEPSIGSMIQL
QQTCRGPEFAHSSIDVEGPFANVNRDDWDVAVASLLQVTPLFSHSLWSNTVRCYLIYTDE
TQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPIDIENQYLTVRKWEIEKSSLVILFIHL
TLPSLLVEDCEEAFLKNSEGKPRLIYHRLEDGQVSSNSVQRFIDQVSHLNKASKAKIIDH
SGDPAEGVYKTFIYVEKIIKQDLLGFENVELVTKDVGSEEALPEEEGLGDVPWDIHDEQE
QMETFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLLAKWIQLQQK
NSPNTLVLSHFVGRPQSTSSESSLIIKRFTLKLMQHSWWASTLTLDPMKLLEEFPRWLEK
LSARHQGSVIIIIDSIDQVQQVEKHMTWLIDPLPVNVRVIVSVNVQTCPPAWRLWPTLHL
DPLNPNDAKAIIIAECHSSDIKLNKEQEKQLERHCRSATTCSALYVTLFGRVVARAGRAG
NLDKILHQCFQCQDTISLYRLVLRFIQDSMGNEMDKELMKQILCLVTVSHNGVSESELMD
LYPEMSWAVLTSLVHSLHKMGLLTYGCGLLKFRHLQAWETVRLEYLEGGPLISSYRQKLI
NYFTTQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFLSQNLYKRGHFAQLLSYWQ
FVGKDKSAMAAEYFDSLKQYEKKCEDEESLVCLAGLCETLGRFLKDLGLLSQAVVPLQKS
LEIRETALDPDHPKVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYGADHPHIARE
LEALATLYLKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQLEELTLGKDT
TDNARTLNELGVLYYLQNNLETAEQFLKRSLEMRERILGPDHPDCAQSLNNLAALCNEKK
QYDKAEELYERAFDIRRQALAPDHPSLAYTVKHLAILYKKMGKLDKAVPLYELAVEIRQK
SFGPKHPSVATALVNLAVIYSQMKKHIEALPLYERALKIYEDSLGQMHPRVGETLKNLAV
LSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGDTFSLKTTHSPNVFLHQGP
R
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggcgtcgtccctggtgcctcccgcggcgggcggcggcggggaggtgatcgag
gacacgtacggggcgggcggcggcgaggcgtgcgagatcccggtggaggtgaagcccaag
gcccgcctgctgcgcggctcgctccgcagggccgcggggctgacgggcggccagctccaa
gtcggcgccagcttcaggtcgacgggctcggcggggcccgagctggagtgcgcggcggcc
gagtacgagcggctcaagaaggagtacgacatcttccgcgtcagcaagaaccaggagctg
ttggccatgggccgccgcgaggccaagctcgactcggagaacaagcggctgcgggccgag
ctgcaggcacttcaaaaaacttatcagaagatcctgcgagaaaaggaaagtgccttagaa
gcaaaatatcaagccatggagagagcatctacatttgaacatgacagagataaagtcaaa
cgacagttcaagattttcagggagaccaaggaaaatgagattcaggatttactgcgggcc
aagcgggagttggagagcaaactccagaggctacaggctcaggggatccaggtatttgat
cctggagaatcggattccgatgacaactgtacggatgttactgctacagggactcactgt
gaatattggacaggtggagccttgggcagcgaaccgtccatagggagcatgatccaactg
cagcagacctgccggggcccagagtttgctcatagctccatcgacgtggaaggacccttt
gcaaatgtcaacagagatgactgggatgttgctgtggctagtttgttacaagttactccc
ttgttttcacattctctatggagcaatactgtcagatgttacctcatttacacagatgag
acacagcctgaaatggatcttttccttaaggactattcaccaaaacttaaaagaatgtgt
gagacaatgggatattttttccatgctgtatattttcccatagatattgaaaatcaatac
cttactgtcaggaaatgggaaattgagaagagttccttagttattttattcattcattta
actttacccagccttctagtggaggactgtgaagaagcttttctgaagaactcagaaggc
aaaccacgcctaatctaccaccgtttggaagatgggcaggtcagttccaactctgtccag
agattcatcgatcaagtttctcacctgaacaaggccagcaaagccaagatcattgatcat
tccggagaccctgcagaaggggtgtataagactttcatttatgtggaaaagatcattaaa
caggaccttcttggctttgagaacgtggagctggtgacaaaggatgtgggcagtgaagag
gcccttccagaggaggagggtttgggtgatgtgccatgggacatccatgacgaacaagag
caaatggaaacttttcagcaagcttcaaattcagcccatgagctgggctttgaaaagtat
taccagcggctgaacgacctcgtggctgctccagctccgatcccaccactgctcgtatct
ggaggaccaggttctggaaagtcccttcttttagccaagtggattcagttgcaacagaag
aattctccaaatacactagttctttctcattttgtggggagaccccagtctaccagctcc
gagtcttccttgattattaagcgattcactctcaagctgatgcaacactcttggtgggct
tctaccctcacactggatcctatgaagcttctggaagaatttccacgttggctggaaaag
ctctctgcccgccatcaaggcagcgtcatcatcattattgattctatagatcaagtgcag
caagttgaaaagcacatgacatggctgatagacccactgccagtgaatgtcagagtaatt
gtctctgtgaatgtgcaaacatgccctccagcatggaggttgtggccaacacttcatctt
gatcctttaaatccaaatgatgcaaaagctattataattgcagaatgccattcttcggac
atcaaattgaataaagagcaggagaagcagctggaacgacactgtcgttccgccacaact
tgcagtgccctgtatgtcacccttttcggcagagtggtggctcgtgcggggagagcagga
aacttggataaaatccttcatcagtgtttccagtgtcaagatactatttccctgtacaga
ctggtccttcggttcatccaggactccatggggaatgagatggacaaagaactcatgaaa
cagattctctgccttgtaactgtcagtcacaatggcgtgagtgagtctgagctaatggat
ctttaccccgagatgtcctgggccgtcttaacctccctggtgcacagtttacacaagatg
ggtttgctgacctatggttgtggtttgctcaagtttcgacacctgcaggcatgggagaca
gtgaggctggagtacctggaaggtgggccactcatctcctcctacaggcagaagctcatc
aactacttcaccacacagctcagccaggaccgtgtgacgtggaggagcgccgatgagctc
ccctggctcttccagcagcaggggagtaaacagaagttgcacgattgccttcttaatctc
ttcctgtctcagaatctttataaaaggggccactttgcccagctgctgagctactggcag
ttcgttggcaaagacaaaagtgctatggcggctgaatactttgattcactgaagcaatat
gagaagaaatgcgaggatgaggagagcttggtgtgcttggcaggtctctgtgaaaccctg
gggcgctttctcaaagacctaggtctgctcagtcaggctgttgtccctttgcagaagtcc
ctagaaattcgagaaactgctctagaccctgatcaccccaaagtggctcagtccctccac
caactcgccagcgtgtatgtgcagtggaagaagtttggcaatgcagagcagctgtataaa
caggccctggaaatctccgagaatgcctacggggccgaccacccccacatcgctcgggag
ctagaggcacttgcgactctgtacctaaagcaaaataagtatgaacaagctgaacatttt
aggaaaaagtcttttaaaattcgtcagaaagctacaaggagaaaaggcaacttgtatggc
tttgcccttcttcgccgaagggctctccagttagaggagctcacgttggggaaggacacc
actgacaatgctcggacccttaatgaactaggtgttctctactatcttcagaataacctg
gaaacagccgaacagtttctgaaacgttccttagagatgagggagcgaatcctgggacct
gatcacccagactgcgcacagtctttgaataaccttgcagcactctgcaatgaaaagaaa
cagtatgacaaagcagaggaactttatgaaagagcttttgacattcggagacaggcctta
gctcctgatcacccttccttggcttacacagtgaaacatcttgccatcttgtataagaaa
atggggaaacttgacaaagctgtacctttgtatgagctggcggtggaaattcggcagaaa
tcctttggccccaagcaccccagtgtagctacagccttggtgaacttggctgttatctac
agccaaatgaaaaagcacatcgaagccttgcctttatatgaaagagcattaaagatttat
gaagacagcctgggtcagatgcatcctcgagttggagaaacattaaaaaatttagctgtg
cttagctatgaagaaggggattttgaaaaagctgcggaactatacaaaagggcaatggaa
atcaaagaagcagaaacgtcccttttgggtggaaaagctccttcccgacactcatccagt
ggagacacatttagtttaaaaaccacccattctccaaatgttttccttcatcaaggacca
aggtaa
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