Suncus etruscus (white-toothed pygmy shrew): 125998239
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Entry
125998239 CDS
T09902
Symbol
RPN1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00510
N-Glycan biosynthesis
setr00513
Various types of N-glycan biosynthesis
setr01100
Metabolic pathways
setr04141
Protein processing in endoplasmic reticulum
Module
setr_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
125998239 (RPN1)
00513 Various types of N-glycan biosynthesis
125998239 (RPN1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125998239 (RPN1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
FliD_C
DUF3221
MTR4_beta-barrel
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
125998239
NCBI-ProteinID:
XP_049622474
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Position
20:complement(29630542..29654550)
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AA seq
612 aa
AA seq
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MALAARRLPLPLLLLLLGAFGAPHAGRASPDGPALVNEDVKRTVDLSSHLAKVTAEVVLA
HPGGGEASARATSFLLALEPELEARLAHLGVQVKGEDEEENNLEVRETKIKGKSGRFFTV
KLPSALESGAKVTVIVETVYTHVLQPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTTRV
KLASRNVESYTKLGNPTRSEDVLDYGPFRDVAPYSEDPFKVHYENNSPFLTITSMARAIE
VSHWGNIAVEENVDLKHTGAALKGPFSRYDYQRQPDSGVSSIRSFKTILPAAAQDVYYRD
EIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIIGYNLPSYEYLYNMGDQYALKIRF
VDHVFDEQVIDSLTLKIVLPEGAKNIQVHSPYEISRAPDELHYTYLDTFGRPVIVAHKNN
LVEQHIQDIVIHYTFNKVLMLQEPLLVVAAFYILFFTVIVYVRLDFSITKDPAAEARMKV
ACITEQVLTLVNKRIGLYRHFDETINRYKQSRDASTLNSGRKNLEAEHKALTSEIAQLQS
RLKTEGSDLCDRVSEMQKLDTQVKELVMKSAVEAERLVAGKLKKDTYVENEKLISGKRQE
LVTKIDHILDAL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgccgcccgccggctgccgctcccgctgctgctgctgctgctcggcgccttc
ggggccccgcatgccggccgcgcctccccggacgggcccgcgctggtgaacgaggacgtg
aagcgcacggtggacctgagcagccacctggccaaggtgacggccgaggtggtcctggcc
cacccgggtggcggcgaggcctcggcccgggccacgtccttcctgctggcgctcgaaccc
gagctcgaggcgcgcctggctcacctgggcgtgcaggtaaagggagaagatgaagaagag
aacaatctggaagtacgagaaaccaaaattaaggggaaaagcggaagattcttcactgtc
aagctcccttctgctctcgaatcgggggccaaggttactgtcatcgtggagacggtctat
actcacgtgctgcagccttacccgacccagatcacccagtcagagaagcagtttgtggtg
tttgaggggaaccattacttctactctccctacccaacgaagacacagaccacccgtgtg
aagctggcttctcggaacgtcgagagctacaccaagctggggaaccccacacgctccgag
gacgtgctggattatgggcctttccgagacgtggccccctatagcgaggaccctttcaaa
gtgcattatgaaaacaacagccctttcctgaccatcaccagcatggcccgtgccattgaa
gtctctcactggggcaacatcgctgtggaggagaacgtggacctgaagcacacaggcgcc
gctctgaagggccccttttcccgctacgactaccagaggcagcccgacagtggggtctcc
tccatccgctccttcaagaccatcctcccagccgcagcccaggacgtgtattaccgggat
gagattgggaatgtttccaccagtcacctccttattctggatgactccgtggagatggaa
atccggcctcgatttcctctctttggtggatggaaaacccattacatcatcggctacaac
ctaccgagctatgagtacctctataatatgggtgaccagtacgcactgaagataaggttt
gtggaccacgtatttgacgaacaggtgatcgactctctgaccctgaagatagtcctgcct
gaaggagccaagaatatccaggtccacagtccctatgagatcagccgtgcccccgatgag
ctgcactacacctaccttgacacctttggccgccctgtcattgtggcccacaagaacaac
ctggtggagcagcacatccaggacattgtgatccactacacattcaataaggtgctcatg
ctgcaggagcccctcctggtggtggccgccttctacattctgttcttcaccgtcattgtc
tacgtcaggctggacttctccattaccaaggacccagctgcagaagctaggatgaaggtg
gcctgcatcacagagcaggtattgaccctggtcaacaagaggatcggcctgtaccggcac
tttgacgagaccatcaatagatacaagcagtcccgggacgcgtccaccctcaacagcggc
aggaagaacctggaggcggagcacaaggccttgaccagtgagattgcacagctgcagtcc
aggctgaagaccgagggctcggacctgtgcgacagagtgagcgagatgcagaagctggac
acccaggtgaaggagctggtgatgaagtcggcggtggaagctgagcggctggtagccggc
aagctcaagaaggacacctacgtggagaatgagaaactcatctcaggaaagcggcaggag
ctggtcaccaagattgaccacatcctggatgctctgtag
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