Suncus etruscus (white-toothed pygmy shrew): 125998420
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Entry
125998420 CDS
T09902
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
125998420 (NPAS3)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125998420 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
125998420
NCBI-ProteinID:
XP_049622535
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All DBs
Position
2:complement(54898477..55866724)
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AA seq
944 aa
AA seq
DB search
MGRVGAAANGTPQNVQGITSYQQRLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAA
ITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSELCMRKTP
CEVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQ
VELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVE
STSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPS
QIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRC
YHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNI
IWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNDNSKSDEK
GNQSENSEDPEPDRKKSGNTCDDEMNCHDDGHSSSNPDSRDSDDSFEHSDFEQPKAAEDG
FGALGPMRIKVERYVESESDARLQACESLTSDSAKDSDSASEAGAQAPGAQHPKRKRRRK
RQKGGSASRRRLSSASSPGGGGGGGGGAAGLEAAGLAEPPRLLASPHSASVLKIKTEIAE
PINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQGSAGGGGGGLHVAIPDSVL
TPPGADGARKTQFSAPATPALAAGASDPLSPPLSASPRDKHPGGGGGGASGASGGGGNSS
NSSSSNGSATSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAASSTAAQRVYTTGTIR
YAPAEVTLAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVS
AASLTQMPTGNVFTTAEGLFSTTLPFPVYSNGIHAAQALERKED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggagggtcggcgccgcggccaacggcaccccgcagaacgtccagggcatcacctcc
taccagcagcgcttgcaagcactgagaaaagagaaatcccgagatgctgcgcgatcccgt
cggggaaaggaaaattttgagttctacgaattggccaaattgttgcctcttcctgcagcc
atcactagccagcttgacaaggcatccatcattcgacttacaattagttatctgaaaatg
agggactttgctaaccaaggggaccctccatggaacttgcgaatggaaggccctccacca
aacacatcagtaaaagggatacaaatgtggaaatctgaactctgcatgagaaagacacca
tgtgaagttataggtgcccaacgaaggagaagccccagtgcactggccattgaagtattc
gaagcacatttgggaagtcacattttgcagtctctggatggctttgtatttgcactaaat
caagaaggaaaatttttgtatatatctgaaacagtctccatctacctaggcctctcacaa
gtggagctgacaggcagcagtgtctttgactacgtgcatcctggggaccacgtggaaatg
gcagagcagctgggcatgaaactcccacccgggcggggtcttctctcccagggcacagct
gaagacggcgccagttctgcatcttcctcctcacagtctgagaccccagagccagtggaa
tcaaccagccccagtctgctaaccactgacaacacccttgagcgttcctttttcatccga
atgaaatctactttgaccaaacgcggcgtgcacatcaaatcatcaggatataaggtgatt
cacatcacaggccggctacgactgagggtgtccttatcccacgggcggaccgtccccagc
caaatcatgggtcttgtggtggtggcccatgccctgcctccccccaccatcaatgaagtc
agaatcgactgccacatgttcgtcacacgagtaaacatggacctcaatatcatttactgt
gaaaataggattagtgattatatggatctgacacctgtagacattgtagggaagagatgc
taccacttcatccatgcagaagatgttgagggcatccggcacagtcacttggacttactg
aataagggccagtgtgtgacgaagtactatcgttggatgcagaagaatggaggctatatt
tggatacagtctagtgccaccatagctattaatgccaagaatgcaaatgagaagaatatc
atctgggtgaactatcttcttagtaatcccgagtacaaggataccccaatggatatagca
cagctcccccatctgccggagaaaacttcagagtcctcagagacatctgactcagagtca
gactctaaagacacctcaggtattacagaggacaacgacaactccaagtcggacgagaag
ggaaaccagtcagagaacagcgaggaccccgagcccgatcggaagaagtcgggcaacacg
tgcgacgacgagatgaactgccacgacgacggccacagctccagcaaccccgacagccgc
gacagcgacgacagcttcgagcactcggacttcgagcagcccaaggcggccgaggacggc
ttcggcgcgctgggcccgatgcgcatcaaggtggagcgctacgtggagagcgagtcggac
gcgcggctgcaggcctgcgagtcgctcacgtccgacagcgccaaggactcggacagcgcg
agcgaggcgggcgcgcaggccccgggggcgcagcaccccaagcgcaagcggcggcggaaa
aggcagaagggcggcagcgccagccgccggcgcctgtccagcgcgtcgagccccgggggc
ggcggcggcggcggcggcggcgctgctggcctggaggccgcgggcctggccgagcccccg
cggctgctggcctcgccccacagcgcctcggtgctcaagatcaagacggagatcgccgag
cccatcaacttcgacaacgacagcagcatctggaactacccgcccaaccgcgagatctcc
aggaacgagtctccctacagcatgaccaagccccccagctcggagcacttcccctccccg
cagggcagcgcgggcggcggcggcggggggctgcacgtggccatcccggactcggtgctc
acgccccccggggccgacggggcccgcaagactcagttcagcgcgcccgccaccccggcc
ctggccgcgggggcctccgacccgctgtcgcccccgctctcggcgtccccgcgggacaag
caccccgggggcggcggcgggggcgcgagcggggcctccggcggcggcggcaacagcagc
aacagcagcagcagcaacggctcggccacgtccaactccttgctctacaccggggacctg
gaggcgctgcagcggttgcaggcgggcaacgtggtgctgcccttggtgcaccgggtgacc
gggaccctggcggccagcagcacggcggcgcagagggtctacaccacgggcaccatccgc
tacgcgcccgccgaggtgaccctggccatgcagggcaacctgctgcccaacgcgcacgcc
gttaacttcgtggacgtcaacagccccggcttcggcctcgaccccaaaacgcccatggag
atgctctaccaccacgtgcaccggctcaacatgtcgggacccttcgggggcgcggtgagc
gcggccagcctgacgcagatgcccacgggcaacgtgttcaccacggccgagggactcttc
tccaccacgctgcccttcccggtctacagcaacggcatccacgcggcgcaggccctggag
cgcaaggaggactga
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