Suncus etruscus (white-toothed pygmy shrew): 125998478
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Entry
125998478 CDS
T09902
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125998478 (PNN)
03015 mRNA surveillance pathway
125998478 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125998478 (PNN)
03041 Spliceosome [BR:
setr03041
]
125998478 (PNN)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125998478 (PNN)
Spliceosome [BR:
setr03041
]
Complex C
Other components
EJC/TREX
125998478 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
125998478
NCBI-ProteinID:
XP_049622540
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All DBs
Position
2:complement(49670061..49680734)
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AA seq
731 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVNRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQTMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGMIHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPAKENASALEMETEPEDKEEKESEPQPEPLAQSQPLA
QPQSQTPPQPQPQAQAQPQSQSQSHTVLQPQPVTQPETLPLAVLQPPPQVIQEPGHLLPE
RKEFPVESLKPTEVKVEPGLTSHPESKNKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSS
TTSSSSGSSSSSASSSSRSSSSSSSSTSGSSSRDSSSSSTSSSESRSRSRGRGHNRDRKH
RRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSER
DRKSDRKDKRR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgcgaactttgcaggagcagctggagaaggccaaagagagcctcaag
aacgtcgatgagaatattcgcaagctcaccgggcgggatcctaacgatgtgaggcccatc
caagcccggttgctggccctttctggtcctggtggaggtcgaggacgtgggagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcaataggctgggtggggagcgtcggactcggagagaatcacgccaagaaagc
gacccagaagatgatgatgttaaaaagccagctttgcaatcttcagttgtagctacctcc
aaagaacgcacacgtcgagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
agaaaccggagaatatttggcttgttgatgggcactctccaaaagtttaaacaagagtct
actgttgctactgaaaggcaaaagaggcgccaggaaatcgaacagaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaatgagaggagagaactatttgaggaaaggcgt
gctaaacagacagagttgcggctcttggaacagaaggttgagcttgcacagctacaagaa
gaatggaatgagcataatgccaaaataattaaatatataagaactaagacaaagccccat
ttattttatattcctggaagaatgtgcccggctacccaaaaactaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaaacaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggagaag
gaaataggtatgattcatagtgatgcagagaaagaacaggaggaggaggagcaaaaacag
gaaatggaggttaagatggaagaggaaactgaggtaagggaaagtgagaagcaacaggat
agtcagcctgaagaagttatggatgtactagagatggtggagagtgtcaaaaatgtaatt
gctgagcaagaggtaatggaaaccaatcaagttgaaagtgtagagccttcagaaaatgaa
actagtaaagaattggagccagaaatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgcgaaagagaatgccagtgctctggaaatggaaacggagcctgaggac
aaagaagagaaagaatctgagccccaacctgagcctctggctcagtcgcagcctctggct
cagccccagtcccaaactccacctcagcctcaacctcaggcacaggcacagccccagtct
cagtctcagtcccacacagtcctccagccccagcctgttacccaacctgagactttgcca
ttagctgttttacagccaccacctcaggttattcaggagccagggcatttattgcctgag
aggaaagagtttcctgtagagtctctaaaacccactgaggtgaaagtagaaccgggcttg
acgtcacatccagagagcaagaacaaaaccaaaactaggagtagaagtagaggtcgagct
agaaataaaacaagcaagagtagaagtcgaagcagcagtagtagtagttctagtagtagt
acaaccagtagcagcagtggaagcagttccagcagtgctagtagcagcagtcgaagtagt
tccagtagcagctccagtacaagtggaagtagtagcagagatagtagcagcagcagcact
agtagtagtgagagtagaagtcggagtaggggccggggacataacagagacagaaagcac
agaaggagtgttgatcggaagagaagggatacttcaggactagaaagaagtcacaaatct
tcaaaaggcggtagtagtagagatacgaaaggatcaaaggataagaattccagatccgac
agaaagaggtctatttcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaaga
gaccgaaaatcagacaggaaagacaaaaggcgttaa
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