Suncus etruscus (white-toothed pygmy shrew): 125998620
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Entry
125998620 CDS
T09902
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
125998620 (SCFD1)
Membrane trafficking [BR:
setr04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
125998620 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125998620 (SCFD1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
125998620
NCBI-ProteinID:
XP_049622619
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All DBs
Position
2:complement(57929027..58022971)
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AA seq
634 aa
AA seq
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MAAAASIRERQTVALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDM
GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLE
DIANAALAASAVTQVAKVFDQYLNFITLEDDMFILCNQNKELVSYRAINRPDITDTEMDT
VMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAMKLDKKLRENLRDARNSLFTGDTLGA
GQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGMENSPAGAR
PKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELDSYRAQEDEVKRLKSIMGLEGED
EGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFECEEKI
MSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQAPSEADLEQYKKALTDAGCNLS
PLQYIKQWKAFAKMASAPASYGNTTTKSMGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVT
RILDNLMEMKSNLETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLV
DYIKGKQGKHILYGCSELFNATQFIKQLSQLGQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagccagtattcgagagcgacaaacagtggctttgaagcgtatgctgaat
ttcaatgtccctcatgttaaaaacagcactggagaaccagtatggaaggtacttatatat
gatagatttggccaagatatcatctctcctctcctgtctgtgaaagaactgagagatatg
ggaattactttgcatctacttttgcactctgatcgagatcctattccagatgttcctgca
gtgtactttgtaatgccaacagaagaaaatattgatagaatgtgccaggatcttcgaaat
caactctatgaatcatactatttaaattttatttctgctatctcaagaagtaaactggaa
gatattgccaatgcagcattagctgctagtgcagtaacacaagtagccaaggtttttgat
cagtatctcaattttattactttggaagatgatatgtttatattatgtaatcaaaataag
gagcttgtttcataccgtgccattaatagaccagatatcacagacacagaaatggatact
gttatggacactatcgttgatagcctcttctgcttttttgttacactaggtgctgttcct
ataatcagatgttcaagaggaacagcagcagaaatggtagctatgaaattagataagaaa
cttcgggaaaatctaagagatgcaagaaacagtctctttacaggtgacacacttggagct
ggccaattcagcttccagagacctttgttagtccttgtggacagaaacatagatttggca
actcctttacaccacacttggacttaccaagccttggtgcatgatgtattggatttccac
ttaaatagagttaatttggaagaatcttcaggaatggaaaattctccagctggtgcaagg
ccaaagaggaaaaacaaaaagtcttatgatttgactccagttgacaaattttggcagaaa
cataaaggaagtccattcccagaagttgcagaatcagttcagcaagaactagactcttac
agagcacaggaagatgaagttaaacgacttaaaagcattatgggactagaaggggaagat
gagggagccataagtatgctatctgataatactgctaagctaacttcagctgttagttct
ttaccagaactccttgaaaagaaaaggcttattgatctccatacaaatgttgctactgct
gttttagaacatataaaggcaaggaaactggatgtatattttgaatgtgaagaaaaaata
atgagtaaaactactttagacaaatctcttctagatataatatcagaccctgatgcagga
actcctgaagataaaatgagactgtttcttatctattacataagcacacagcaagcacct
tctgaggctgatttggagcaatacaaaaaagctttaactgatgcaggttgcaatcttagc
cccttacaatatatcaaacagtggaaggcttttgccaaaatggcctcagctcctgccagc
tatgggaatactaccactaaatcaatgggtctcttgtcacgagtcatgaatacaggatct
cagtttgtgatggaaggagtgaagaacctggtactgaagcagcaaaatcttcctgtgact
cgtattttagataatcttatggagatgaagtcaaaccttgaaactgatgactatagatat
tttgatcccaaaatgctgcggggaaatgacagttcagttcccaggaacaaaaacccattt
caagaggcaattgtttttgtcgtgggaggaggcaactacattgaatatcaaaatctcgtt
gactacataaagggaaaacaaggcaaacacattttatatggctgcagtgagctttttaat
gctacacaattcattaaacagctatcacaacttggacagaaataa
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