Suncus etruscus (white-toothed pygmy shrew): 125998714
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Entry
125998714 CDS
T09902
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125998714 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125998714 (MID1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125998714 (MID1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125998714 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
PRY
zf-C3HC4
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125998714
NCBI-ProteinID:
XP_049622732
LinkDB
All DBs
Position
X:16794982..16933662
Genome browser
AA seq
666 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
HVITLSHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERTFEAHTMTSAEKVLCQ
FCDQDPARDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDEQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPSSPTIREELCTASYDTITVHWTSDDEFSVVSYELRYTI
FTGQANLVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSKKSHTPERFTSQGSYGIAGNVFIDSGRH
YWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCHNNWVARHNSKEIPIEPAPHL
RRVGILLDYDNGSIAFYDALNSMHLYTFDITFSQPVCPTFTVWNKCLTIITGLPIPDHLD
CAEQLS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
cttctgctaccctgcgcccacagcctctgcttcaactgtgcccatcgcatcctggtgtcg
cattgtgccaccaacgagtctgtggagtccatcaccgccttccagtgccccacctgcaga
catgtcatcaccctcagccaccgcggtctagacgggctgaaacgcaacgtcactctgcag
aacatcatcgaccgattccagaaggcctcggtgagcggccccaattcccccagcgagacc
cgccgagaacgcacctttgaagcccacaccatgacctccgccgagaaagtgctctgccag
ttctgtgaccaggatcctgcccgggatgcggtgaagacctgtgtcacttgtgaagtgtcc
tactgtgatgagtgcctgaaagccactcaccccaacaagaagcccttcacgggccaccgt
ctgattgagccaattccggactctcatatccgggggctgatgtgcctggaacacgaggat
gagaaggtgaatatgtactgtgtgaccgatgagcagttaatctgtgccttgtgtaaactg
gttgggcggcaccgagatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaacctcaccaacctgattaagaggaacacagaactggagacgctt
ttggccaaactcatccaaacctgtcagcatgtggaggtcaatgcatcacgtcaagaggcc
aaactgatggaagagtgtgatcttctcattgagatcattcagcaaagacggcaaattatt
ggaaccaagatcaaagaaggaaaggtgatgaggcttcgcaaactggctcagcagattgca
aactgcaaacagtgcattgagcgctcagcatccctcatctcgcaggcagagcactcactc
aaggagaatgatcatgctcgcttcctccagactgcaaagaatatcacggagagagtctcc
atggcaactgcatcttcccaagtcctaattcctgaaatcaacctcaatgacacatttgac
accttcgccttagatttttcccgagagaagaagttgctagaatgtctggattaccttaca
gctcccagctctcccacaattagagaagagctatgtacagcctcctatgacaccatcact
gtccattggacatccgatgacgagtttagtgtggtttcctacgaacttcggtacaccatc
tttactggacaagccaacctcgtcagtctgtgtaactcagctgatagctggatgattgtg
cccaacattaaacagaaccactacactgtgcatgggctccagagtggcactaaatacatc
tttatggtcaaggccatcaaccaggcgggaagccgcagcagtgagcctgggaagctgaag
acgaacagccagccttttaaactggatcccaagtctgcacatcgaaagctaaaggtatcc
catgataacctgacagtcgagcgtgatgagtcatccaaaaagagtcacactcctgaacga
ttcaccagccaagggagctatggcatagctggcaacgtgttcattgacagtggccgccat
tactgggaagtagtcataagtggaagcacctggtatgccattggcttggcctacaaatcg
gccccgaagcacgagtggattgggaagaactcagcttcttgggcactgtgtcgctgtcac
aacaactgggtggcaagacacaacagcaaagaaatccccatcgagccagcaccccacctc
cggcgagtaggaatcctgctagactatgacaatggctccatcgctttctacgacgctttg
aactccatgcacctctacacctttgacatcaccttctcgcagcctgtgtgccccaccttc
accgtgtggaacaaatgtctgaccattataaccggactccctatcccagaccatctggac
tgtgccgagcagctctcttga
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