Suncus etruscus (white-toothed pygmy shrew): 125998756
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Entry
125998756 CDS
T09902
Symbol
PSMA6
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03050
Proteasome
setr05010
Alzheimer disease
setr05012
Parkinson disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05017
Spinocerebellar ataxia
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125998756 (PSMA6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125998756 (PSMA6)
05012 Parkinson disease
125998756 (PSMA6)
05014 Amyotrophic lateral sclerosis
125998756 (PSMA6)
05016 Huntington disease
125998756 (PSMA6)
05017 Spinocerebellar ataxia
125998756 (PSMA6)
05020 Prion disease
125998756 (PSMA6)
05022 Pathways of neurodegeneration - multiple diseases
125998756 (PSMA6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
125998756 (PSMA6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
setr03051
]
125998756 (PSMA6)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
125998756 (PSMA6)
Peptidases and inhibitors [BR:
setr01002
]
Threonine peptidases
Family T1: proteasome family
125998756 (PSMA6)
Proteasome [BR:
setr03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
125998756 (PSMA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
125998756
NCBI-ProteinID:
XP_049622784
LinkDB
All DBs
Position
2:complement(53423426..53453441)
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgggtccagtgccggttttgaccgtcacattacaatcttttcacccgagggc
aggctctaccaagtagaatatgcttttaaggctattaaccagggtggccttacatcagta
gctgtcagagggaaagattgtgcagtaattgttacacagaagaaagtacctgacaagtta
ctggattccagcacagtgacacacttattcaagataactgaaaacattggctgtgtgatg
acaggaatgacagctgacagcagatcccaagtgcagagggcacgttatgaggcagccaac
tggaagtacaagtatggctacgagattcctgtggacatgctgtgtaaaagaattgctgac
atttctcaggtgtacacacagaatgctgaaatgaggcctcttggctgctgtatgatctta
attggtatagatgaagagcaaggccctcaggtgtacaagtgtgatcctgcaggttactat
tgtgggtttaaagccacagcagcaggagtgaaacaaacggagtcaaccagcttccttgaa
aaaaaagtaaagaagaaatttgattggacatttgaacagacagtggaaactgcaattact
tgcctttctactgttttatcaattgatttcaaaccttcagaaatagaagttggagtagtt
acagttgaaaatcctaaattcaggattcttacagaagcagagattgacgctcatcttgtt
gctctagcagagagagactaa
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