Suncus etruscus (white-toothed pygmy shrew): 125998765
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Entry
125998765 CDS
T09902
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125998765 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setr03032
]
125998765 (POLA1)
Enzymes [BR:
setr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125998765 (POLA1)
DNA replication proteins [BR:
setr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
125998765 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
125998765
NCBI-ProteinID:
XP_049622790
LinkDB
All DBs
Position
X:20188810..20529800
Genome browser
AA seq
1452 aa
AA seq
DB search
MIGKLAVSDSENFVTSRSRREKKTKKGRQEALERLKRAKAGEKYKYEVEDFTNVYEEVDE
EQYSKLVQERQDDDWIVDDDGVGYVEDGREIFDDDLDDNALDCHEKGKDDKVLHKDKRKV
KKAAVTKPNNIKSMFIASAGKKAADKAVDLSKDDLLGDILQDLNTESPQITPPPIIIPKK
RRSLGASLNPFSVPTPKAVPSGKIASPISRKEPALTPVPLKNVGEPVPALGTDDPESGAM
DFEDGDFDEPMDIEKVDTAEPVAAKSGDQKSEAAESVKQEVDPRKGTIGNFLPDVSCWDI
EQEDDSVSAQEVQLDSSHLPLVKGVDEEQVFRFFWLDAYEDQYNQPGVVFLFGKVWIESA
KTHVSCCVLVKNIERVLYFLPREKKIDLNTGNETVTSVTMKDVYAEFDEKIATKHRIMKF
KSKIVEKNYAFEIPDVPEKSEYLEVRYLAEMPQLPQDLKGETFSHVFGTNTSSLELFLMN
RKIKGPCWLEVKNPQLVNQPISWCKVEAMTLKPDLVSVIKDVSLPPLVVMSISMKTMQNA
KTHQNEIIAMAALVHHSFALDKAPPKPPFQSHFCVVSTPKDCIFPYNFIEDISAKKVKVE
VAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINLGKVPHWSKIGRLKRSNM
PKLGGRSGFGERSATCGRLICDVEISAKELIRCKSYHLSELVQQILRTERVVIPVENIRN
MYSESSHLLYLLEHTWKDARFILQLMCELNVLPLALQITNIAGNVMSRTLMGGRSERNEF
LLLHAFYENNYIVPDKQIFRKTQQKTGDDDEEIDGDPSKNKKGRKKAAYAGGLVLDPKVG
FYDKFVLLLDFNSLYPSIIQEFNICFTTVQRIALEAQKVTEDEEQEQIPELPDPSLEMGI
LPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYSRFYAK
PLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVN
KLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTADGHYITKQELKGLDIVRRDWCDLAKE
TGNFVIGQILSDQSRDIIVENIQKRLIEIGENVVNGSVPVSQFEINKALTKDPQDYPDKK
NLPHVHVALWINSQGGRKLKAGDTVSYVICQDGSDLTANQRAYAPEQLQKQENLTIDTQY
YLAQQIHPVVVRICEPIDGIDAVLIATWLGLDPTHFRVHHYHKDEENDDLLGGPVQLTDE
ERYRDCERFKCPCPTCGTVNIYDSVFDGLGSDMEPSLHRCSNINCKASPLTFIVQLSNKL
IMDMRRCVKKYYEGWLICEEPACRSRTRHLPLQFSRYGPLCPVCMKATLRPEYSDKALYT
QLCFYRYIFDVDYALEKLTTDHEKDKLKKQYLTTKVLQDYRKLKNTAEQFLSRSGYSKVN
LNKLFADCAMKA
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgatagggaagttagctgtgtcagattccgagaattttgtaacttctagatcccggaga
gaaaagaaaacaaagaaaggacgccaggaagctttagaaagactgaaaagggctaaagct
ggtgagaagtataaatacgaagttgaggactttacaaatgtgtatgaagaagtcgatgaa
gaacagtattcaaagctagtgcaggaacgccaggatgacgactggattgtggatgatgat
ggtgttggctatgtggaggatggtcgggagatttttgatgatgaccttgatgacaatgcc
cttgattgtcatgagaaaggaaaagatgataaagtactccacaaagacaagaggaaggtg
aagaaagccgctgtgacaaaaccaaacaatatcaagtcaatgttcatagctagtgctggg
aagaaagctgctgataaagctgtagacttgtccaaggatgatctgctaggtgatattcta
caggatctaaacacagagtcaccgcagataactccaccacctataattataccaaagaag
agacgatctctcggtgcttcactgaatcccttttctgtgcctacccccaaggcagttcct
tcaggaaaaattgcttcccctatctcaaggaaggagcctgcgctgactcctgtacctctt
aagaatgtgggagagccggtgccagccttgggtacagacgaccctgagtcgggggcgatg
gattttgaagatggtgattttgatgagcccatggacattgagaaggtggacaccgcagag
cctgtggctgccaagtcaggggaccaaaagagcgaggcagccgagagtgtgaaacaggag
gtggatcccaggaaagggaccataggaaattttctcccagatgtttcttgttgggatatt
gagcaggaagatgacagtgtctctgcccaagaagttcaactggattccagtcacctcccc
ctggtgaaaggggtggatgaggaacaagtgtttcgttttttttggctggatgcttatgaa
gatcagtacaaccaaccaggggtggtgtttctctttggcaaagtttggattgaatcagct
aaaactcacgtgagctgctgtgtcctggtgaaaaacatagagcgagtgctgtattttctt
ccccgggagaagaaaattgatctaaatacagggaatgaaactgtaacttcagttacaatg
aaggacgtctatgctgaatttgatgagaaaatagcaacaaaacacagaattatgaaattc
aaatccaagatagtggaaaagaactacgcttttgagatacccgatgttccagagaaatct
gagtacttggaagttagatatttggccgaaatgccacagcttcctcaggatttaaagggg
gaaacattctctcatgtatttgggaccaacacatccagcttggaactgttcttgatgaac
agaaagatcaaaggaccttgttggcttgaagtaaaaaatccacagcttgtgaatcagccg
atcagctggtgtaaagttgaggcaatgactttgaaaccagacctggtgagtgtaattaag
gatgtcagcctgcctccacttgtggtgatgtctatcagcatgaagacaatgcagaatgca
aagacacatcaaaatgagattattgccatggcggctctggtccatcacagctttgcacta
gacaaagctcccccgaagcctccctttcagtcacacttctgtgttgtgtctaccccaaag
gactgtatttttccatataattttatagaagacattagtgcgaagaaggtgaaagttgag
gttgctgcaacggagagaaccctgctaggttttttccttgcgaaagttcacaaaattgat
cctgatatcattgtgggtcataatatttatggatttgagctggaagtgctactgcagaga
ataaatctgggcaaagttcctcactggtcgaaaataggccgactgaagcgatccaacatg
ccgaagcttgggggtcggagtggatttggggaaagaagtgctacctgtggccggttgatc
tgtgatgtggaaatttcagcaaaggaattgattcgttgtaaaagctaccatttgtctgaa
cttgttcagcagattcttagaactgagagggttgttatcccagtggaaaatatacggaat
atgtacagtgaatcttctcatctgctgtacctattggaacacacctggaaagatgccagg
ttcattttgcagctcatgtgtgagctaaatgttcttccattagccttacagatcactaac
atcgctgggaacgtgatgtctaggacgctgatgggtggacgatcagagcgtaacgagttc
ttgttgcttcatgcattttatgaaaacaactatattgtgcctgacaagcagattttcaga
aaaactcagcaaaaaacgggagatgatgatgaagaaattgatggagatcccagtaaaaat
aagaaaggccgtaagaaagcagcttatgctggaggcttggtactggatcccaaagttggt
ttttatgataagttcgttttgcttctggacttcaacagtttatatccttccattattcaa
gaatttaacatttgttttacaacagttcaaagaattgctttagaggcgcagaaagttaca
gaggatgaagaacaagaacagatccccgaactgccagatccaagcttagaaatgggcatt
ttgcccagagagatccgaaagctggtagaacggaggaaacaagtcaaacaactcatgaaa
cagcaagatttaaatccagacctcattctccagtatgacattcgacagaaggcgctaaaa
ctcacagcaaatagtatgtacggctgcctgggattttcctacagcaggttttacgccaaa
ccactggctgctttggtgacatacaaaggaagggagattttgatgcatactaaagagatg
gtacagaagatgaatcttgaagttatttatggagatacagattcaattatgataaacacc
aacagcaccaatttggaagaagtatttaaattggggaataaggttaaaagtgaagtgaac
aaattgtacaaactacttgaaatagacattgatggtgttttcaagtctctgctattgctg
aagaagaagaaatatgctgctctggttgtagagccaacggcagatgggcattacatcacc
aaacaggagctgaagggtttagatatagttagaagagattggtgtgaccttgctaaagag
accgggaattttgtcattggccagattctttctgatcaaagccgggacattatagtggaa
aacattcagaagaggttaatagaaattggagagaatgtagtcaacggcagtgtccctgtg
agccagtttgaaattaacaaggcattgacaaaggatccccaggactaccctgacaaaaaa
aatcttcctcatgtacatgttgcactttggataaattctcaaggaggcagaaagttgaaa
gccggagacactgtttcttatgtgatctgtcaggatgggtcagatctcactgcaaatcaa
agggcttatgcacctgaacagctgcagaaacaggagaatttaaccattgacacccagtac
tacctggcccagcagatccacccagtcgtggttcggatctgtgagccgatagatggaatt
gatgctgtcctcattgcaacgtggttaggtctcgaccccacccattttcgagttcatcat
tatcataaagatgaagagaatgatgacctacttggtggtccagtgcagcttacggatgaa
gaaagatacagggactgtgagagattcaagtgtccatgcccaacgtgtggaactgtgaat
atttatgacagcgtctttgatggtttgggatctgatatggagcctagtttacatcgctgc
agtaacatcaattgcaaggcttcacctctgaccttcatcgtacagctgagcaacaaattg
atcatggacatgaggcgttgtgtcaaaaaatactatgaaggctggttgatttgtgaggag
ccagcttgtcgcagtcgaactcgccaccttcccctacagttctcaagatatggccccctt
tgcccagtctgcatgaaagccactctgcgaccagagtattctgacaaggccctgtatacc
cagctgtgcttttaccggtacatttttgatgtggactatgcactggagaaacttactacg
gatcatgagaaagataaattaaagaagcagtatctgaccaccaaagttcttcaggactac
agaaaactcaaaaacacagcagagcagttcttgtcccgaagtggctactccaaagtcaac
ctcaacaaactctttgctgactgtgctatgaaggcctaa
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