Suncus etruscus (white-toothed pygmy shrew): 125998797
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Entry
125998797 CDS
T09902
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125998797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
125998797
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125998797
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
125998797
NCBI-ProteinID:
XP_049622819
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Position
X:complement(27596362..27598239)
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AA seq
625 aa
AA seq
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MEYLKEDALEQADNIESVQQDPPKMESATEEKSLQQKLYELYADECEKESEDTQELKSNV
NLLEKLVSGESFPCLVVNLFPGQQGYSMMLKDKNDIYSDTFRLCYDEKKLFDYFDAEQLP
PILIDALEKSEINVFQSGCVVAEIRDYRESITMEPPDYQSRHILLRPTMQTLVHDVESIA
NENKIVTQEDKLLLESQLILATADPLCLDPSVLVACTENKLLYSKQNIDTPAMKYSFQKY
SSTLSTEEELFPYLCHPQLSEQESETDEPFEHKSFLAANIEDLWQESSLIFPVTYEADEE
QNITAETLDQFDDAQSSSSLNLEVRDDHVCNFDIDDELHITNLPFMQSFNDPFISGNRQH
QLNRPKRHKTLPHSFTYDIHGSETNALAMASWSEELMQRNDSYPVPALCSSFTSPTQDSS
GKERGQFETTLVQSSELETMFSPTSPFTEFLLNSGRSASGDNFNPEQSSFLTYPDPVASY
LSPSPLQRSFAKVNQVDTLPTVTIFTSIASHNVSTETTASSLRSPVFSTGISSQIMPDLP
TPSFSETPTTLSTIYSSEITRGLFTISSSKGTPSSSTPNLSSVQNTHSFSKSLVPLTFNS
YEETSGTCSVKLSWSTLEFSTAKSL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagtacctaaaagaagatgccttggagcaagctgataatattgaaagtgttcaacag
gatccacctaaaatggaatcagctactgaggaaaaatctctccagcaaaaactctatgaa
ctatatgctgacgaatgtgaaaaggagtctgaggatacacaggaattaaaaagcaatgtg
aatctgttagagaagcttgtaagtggagaatcgtttccctgtttagtggtcaacctgttc
ccaggacaacagggatattctatgatgctcaaggataaaaacgatatctattcagatact
ttcagactgtgttatgatgagaagaaattgtttgactactttgatgctgaacaattacct
cccattttgatagacgccctggaaaaatccgagatcaacgtttttcagtctgggtgtgtt
gtagcagaaataagggactatagagagtcaatcactatggaaccccctgactaccaaagc
aggcatattctcttacgaccaaccatgcagacattagtccatgatgtagagtcaattgcc
aatgaaaacaagatagtgacccaggaagacaaacttctgcttgagagtcagctgatatta
gctacagctgacccactatgtctagatccttctgtattagtagcctgcactgaaaacaaa
ctgctctacagcaagcaaaatatagacactcctgcaatgaaatacagcttccagaagtat
tcttccaccctgagtacggaagaggaactgtttccttacctatgtcatcctcagctgagt
gaacaagaaagtgaaacggatgagccatttgaacacaaatcatttctagcagcaaatatt
gaagatctgtggcaagagagttccttgatttttcctgtcacctatgaagctgatgaggaa
cagaacattaccgcggagactctggaccaatttgatgatgcacagtcaagctcctcatta
aaccttgaggtaagagatgatcatgtatgtaattttgacattgatgatgagttacatata
acaaacctgcccttcatgcaatcatttaatgatccatttatctctgggaacagacaacac
caattaaatagacctaagagacataaaactctccctcattcttttacatatgacatacat
gggtcagaaactaatgctctagctatggccagttggtctgaggaattgatgcagaggaat
gacagctatccagtgccggctttgtgtagtagctttactagtcccacacaagattcttcg
gggaaagaaagaggacagtttgaaaccacattggttcagtcttcagaactggagaccatg
ttcagtcccacatctccattcactgaatttctcctcaattcaggaaggagtgcctcaggg
gacaattttaatccagaacagagcagttttcttacatatccagatcctgtagcttcttat
ctatcaccaagtcctttgcagaggtcctttgcaaaggtcaatcaagttgatacacttcct
acagtcacgattttcacatccatcgcttctcataatgtctcgacagagacaactgcaagt
tcattaagatctccagtattctccactgggatttcatcacaaataatgccagacttgccc
acgcccagtttctcagagacacccacaaccctttccactatatattcatcagaaataacc
cgaggcctatttactatcagctcctcaaaaggtaccccaagttcatccactcccaacttg
tcttcagtccaaaacactcatagcttctcaaaatccctggtcccattaacttttaactct
tacgaagaaacttcaggcacatgttctgtcaaattatcatggagtaccttagaattctcc
acagcaaaatcattgtga
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