Suncus etruscus (white-toothed pygmy shrew): 125998904
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Entry
125998904 CDS
T09902
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03008
Ribosome biogenesis in eukaryotes
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr05014
Amyotrophic lateral sclerosis
setr05164
Influenza A
setr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125998904
03015 mRNA surveillance pathway
125998904
03008 Ribosome biogenesis in eukaryotes
125998904
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125998904
05168 Herpes simplex virus 1 infection
125998904
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125998904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125998904
03009 Ribosome biogenesis [BR:
setr03009
]
125998904
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125998904
mRNA cycle factors
Stress granule specific factors
125998904
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125998904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
125998904
NCBI-ProteinID:
XP_049622892
LinkDB
All DBs
Position
X:complement(71325515..71345115)
Genome browser
AA seq
623 aa
AA seq
DB search
MSDDCKEEFFPPKKKYRKSKDEENNDGGSYTQRIKRDSSFPDNRDEKNSFSSCGQHRSKK
RVNYQYEKKDKTSVRKVEKLPTIEEMENSEDETPEEWFSVTIPNGRRYEKIWLLDSIQKQ
CSVPFKSVDFHYFKNMARFFVQNSVTACALKEVNCKIFDNKNQKINICVNQSYGPDSVQN
KLAPEEMMQLELTLNRRYDISKRSLDLERLRFDSDLMNHDIDIFLNRRYCMSAMLEIIEK
KFPNLLSLNLCNNKLYQLDGLSDIVQKVPTIKVLDLSHNKLTSLWEVSKMKTLKIEALRL
IGNPFCKTFKNKSSYKRAVMRLFPMLLKLSECKGPRTMEEYVLQFLQQYYMIYDSENRQN
LLGVYHEEAYFSLSIPFDPNNPISLSKYFKENRNMKILKDSNNQIQLLKHTKSDILHTLC
MLPQTQHHTSSFLLDLWVQTETMLCFSVQGMFKEVKDQNQSFVHAFTRTFITVPASNSSM
CIVNDELFVRTATINEVQSAFPTPFASFLITLSKEQQEMVKNFSTQSGMNLQWSHKCLQE
NQWNFENAAHNFLVFKFEILDYYRYKKTIRRTEKAEKRIKAKVLEEGEKMERTMLTIPNN
QRRATPNLRDVNADASQYGEERA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgactgtaaagaagaattttttccaccaaagaagaagtataggaaatccaaa
gatgaagaaaacaatgatggtggaagctatactcaaagaataaagagagatagttctttt
ccagataaccgtgatgaaaaaaacagtttttcttcctgtggtcaacatagaagcaagaag
agagtgaattatcagtatgaaaaaaaagacaagactagtgtaaggaaagttgaaaaactt
ccaacgatagaagagatggagaactcagaagatgaaaccccagaagaatggttcagtgtt
acaattcccaatgggagaaggtatgagaagatctggcttctggattccattcagaaacag
tgcagtgtaccctttaaatcagtggattttcactactttaaaaatatggctcgattcttt
gtccagaattctgtcactgcctgtgcattgaaagaagtcaactgtaagatttttgataac
aaaaaccaaaagataaatatctgtgtcaatcaatcttatggacccgactctgtgcagaat
aaattggcgccagaagaaatgatgcagctagagctgaccctgaacagaaggtatgatatt
tccaagagatctcttgacctggagaggctccgctttgactcagatttgatgaaccatgac
atagatatattcttgaatagaagatactgcatgtctgctatgctggagattatagaaaaa
aaattccccaatcttttgtccttgaacttgtgcaataacaaactctaccaacttgatggt
ctgtcagacattgtacagaaggttcctacaatcaaggtcctggacctctcccacaataaa
ctgacgtcattgtgggaagtgagcaagatgaaaacactgaagattgaagctcttcggctc
atagggaaccccttctgtaaaactttcaaaaacaaatcttcctacaaaagagctgtgatg
cgtttattccctatgttgctgaaactgagtgaatgtaaaggacccaggacgatggaagag
tatgtactgcaattccttcaacagtattacatgatttatgacagtgaaaaccgacagaat
ctccttggtgtttaccatgaggaggcatacttctctctgtccattcctttcgatcccaac
aatccaatcagcttatctaagtactttaaggaaaacaggaatatgaagatactcaaggat
tccaataaccaaattcaactactgaagcatacaaaaagtgacattttacacacactgtgc
atgttacctcaaactcagcaccataccagttctttcctgttagatttatgggtgcaaacg
gaaactatgttatgcttctctgtccaaggaatgttcaaggaggtgaaagaccaaaatcag
agttttgttcatgccttcacccggaccttcattactgtccctgccagtaattccagcatg
tgcatagttaatgatgagcttttcgtgaggactgccactatcaatgaagtccagtctgca
tttcctaccccattcgccagttttttgattactctctccaaggagcagcaagagatggtg
aagaatttctccacccagtctggaatgaacctccaatggtctcacaagtgccttcaagaa
aatcaatggaactttgaaaacgctgctcataatttccttgtgtttaagtttgagatattg
gactattacagatataaaaagactattagaagaacagagaaagcagaaaagagaatcaaa
gcaaaggtgttggaagagggagagaaaatggagaggactatgctgacaattcctaataac
cagagaagggcaactcccaacctcagggatgtgaatgctgatgcctcacagtatggagaa
gaaagagcttag
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