Suncus etruscus (white-toothed pygmy shrew): 125998984
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Entry
125998984 CDS
T09902
Symbol
IGSF1
Name
(RefSeq) LOW QUALITY PROTEIN: immunoglobulin superfamily member 1
KO
K26168
immunoglobulin superfamily member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125998984 (IGSF1)
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Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C19orf38
V-set
VEGFR-1-like_Ig-like
UEV
Motif
Other DBs
NCBI-GeneID:
125998984
NCBI-ProteinID:
XP_049622953
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Position
X:102767792..102786212
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AA seq
1309 aa
AA seq
DB search
MAMRSGRQSQPELWLETNYPKTPWENITLWCKSPSGFPSKFLLLKDETQLTWIRPSQKTI
KVSFHLGALTKTNAGRYKCLYWKEKGWSKPSKVLELEGPGETSKPSLWISAKTSPLPVCS
VDILCHGWMQDIVFMLFKEEPAEYTDYRSSAGTVTIFSVANLTPKSKGMYICRTHIQMYP
TLWSEPSDPLKLIVAGLYPKPTLTAYPGPFMAPGESLHLRCQGPIYGMTFALIRLEGVKK
SFYLKRPVKNEAYFFFRSLKRYDTGRYFCFYYDGSSRGSLLSDVQKIWVTDTFPDSWLLV
HPSPVVQMGQNVSLMCQGSVKGVGLALYKKGEDKALQLLDNTNIDDKKSFFLNNVNYSDA
GIYSCQYSLSWKTSIRVTSHNIVDLVVIDKPPKPSLTAWPSTVFKLGKAITLQCRAPHPV
IEYSLEQEEKTTVKQVSVNGNFIISNIEGKGTGTYSCSYRADAYPNIWSYHSDPLTLMGP
AGFLAWNHVLNEAIRLTLVIQVVALLLIVLWVRWRCRRLRLREAWLLGTAQGVTMLFIVA
ALLCCGLCNGAVTEETEIVMPTPKPELWAETNYPLAPWKNLTLWCRSPSGSTKEFVLLKD
GTGWIATRPATEQVRAAFPLGALTQSHTGSYHCHSWEEMAVSEPSEALELVGADILPKPV
ISASPPVRGQELKIRCKGWLEGMGFALYKEGVQEPVQQLGVVGREAFFTIQRMEDKEEGN
YSCRTHTEKSPFKWSEPSEPVELVIKEMYPKPFFKTCASPLVTAGSRVTFNCSTPHQHMS
FILYKDGSEIASSDRSWSNLGASTAHFLILSVGNGDGGNYSCRYYDFSIWSEPSDPVELV
VTDFYPKPTLLAQPGPVVLPEKNVTLRCQGPFWDMRFALLKEGTQTPLQILSASGNSVDF
LLHTNSVEDSGNYSCVYYETTMSNRGSQLSTPVMIWVTDTFPKPWLFAEPSSVVPMGQNV
TLWCQGPIRGVGYILHKERDDTSAELSETTSNDGAFPITNISGATIGRYSCCYHPDWTSP
IKLQPSNTLELIVTGLLPKPSLSAQPGPVVAPGENMTLHCEGELPDSTYVLLKKGVQEPI
EQQKPNGYKADFWMPSVRSKDSGIYSCVYYLETAPLAASNHSELLEIWVTDKPPKPSLSA
WPNAEFKLGKDITLQCRGPLPGVEFVLEHDGEEAPQQFSEDGDFVINNMEGKGIGNYSCS
YRLQAYPDIWSEPSDLLELVGAAGPAAQECTVGNIVRSSLIVVVVVALGIVLAIEWKKWP
RLRTRGSDTDGRDQTIALEECNLDGEPDTNTSSPSSTSRXTSVEVPVPV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaggagtgggaggcagtctcaaccagagttgtggctagagaccaactatccc
aagaccccttgggaaaacattacactatggtgcaaaagcccctctggatttccaagcaag
ttcctgctgctgaaggatgaaacacagttaacctggatccgcccttcccagaagaccatc
aaagtttcattccacttaggtgcccttactaagaccaatgcaggacggtacaagtgtctc
tactggaaggaaaaaggctggtcaaaacctagtaaagttctagagttggaaggtccaggt
gaaacttcaaaacccagcttatggatctcagcaaaaacctcccctcttcctgtatgtagt
gttgatattctctgtcatggatggatgcaagatatagtattcatgctattcaaagaggag
cctgcagagtacacagattaccggtcctcagctgggacagtaaccatattctccgttgcc
aatttaacgcctaagagcaaagggatgtacatatgccgtactcatattcagatgtatcct
actctgtggtcagagcccagcgaccccctgaaactaattgtggcaggactttatccaaaa
ccaactcttacagcatatcctgggcccttcatggcacctggagaaagcctgcatctcagg
tgtcaagggccaatctatggaatgacctttgctttaataaggcttgaaggtgtgaagaaa
tccttttatctaaagagaccagtaaaaaatgaggcatatttcttcttccggtctttgaaa
agatatgatactggacgttacttttgcttttactacgatggctcatccagaggctcattg
ctcagtgatgtgcaaaaaatctgggtaaccgacactttccctgatagctggctacttgtt
catccaagtcctgtggtccaaatgggtcagaatgtgagcttaatgtgtcaagggtcagtg
aaaggcgtgggacttgcactctataaaaaaggagaagataaagcacttcagctcttggat
aacactaacattgatgacaagaagtcattcttcctcaacaatgtgaactacagtgatgct
ggcatctatagctgccaatattccctctcctggaagacctccatcagggtgacatctcac
aacattgtggatcttgtggttatagataagccccctaagccttctctgacagcctggccc
agcactgtgtttaaactaggaaaggccattacccttcagtgccgagcacctcatccagta
attgaatattcgctggaacaggaagaaaaaacaacagtgaaacaagtctcagtgaatgga
aacttcatcatcagtaatattgaagggaaaggcacagggacttacagctgcagctatcgt
gcagatgcataccctaatatctggtcatatcacagtgatcctctgacgctgatgggacca
gcaggttttctcgcttggaatcatgttttgaatgaagccatcagattgaccctagtgata
caggttgttgctttactgttgatagtcctgtgggtaagatggagatgtcggagactcaga
ctcagagaagcctggttgctgggaacagctcaaggggtcaccatgctcttcatagtcgcg
gccctgctctgctgtggactgtgtaatggggcagtgacagaagagactgaaatagtcatg
ccaactcctaagcctgagctgtgggcagagaccaactatcctctggccccgtggaagaac
ttaaccctctggtgcagaagcccttctggttcaaccaaggagtttgtgctgctaaaagat
ggaaccgggtggattgccactcgtccggccacagagcaggtccgggcagctttccccctt
ggcgccttgacccagagccacaccgggagttaccactgtcattcatgggaagagatggct
gtgtctgagcccagtgaggccctggaactagtgggagcagatatcctccccaagcctgtc
atttctgcttctcccccagtccgaggacaggaactgaaaatccggtgcaaaggatggctg
gaaggcatggggtttgcgctctataaggagggggtacaggaacctgtccagcaacttggt
gtggttgggagagaagcctttttcacaatccaaagaatggaggataaagaggaaggcaat
tacagctgccgaactcatactgaaaagagccccttcaagtggtctgagcctagtgagcct
gtggagcttgtcattaaagaaatgtaccccaagcccttcttcaagacatgtgccagtcct
ctggtgactgctggttcccgagtaactttcaactgctctactccccaccagcacatgagc
tttattctttacaaagatggaagtgaaattgcatccagtgacagatcctggtcaaatctg
ggtgccagtacagctcactttctcatcctttcggtgggcaatggtgatggagggaattat
agctgccgttattatgacttttctatctggtctgagcccagtgaccctgtggagcttgtg
gtgacagatttctaccccaagcctactctcttggctcaaccaggtccagtggtacttccg
gaaaagaatgtgaccctgcgctgccaaggacctttctgggacatgaggtttgcccttctg
aaggaaggaacacagactcccttacagatcctgagtgcttcagggaactcagttgacttc
cttctccacactaatagtgtagaggattctgggaactacagctgtgtctattatgagaca
accatgtccaacaggggatcacagctcagcacacccgttatgatctgggtgactgataca
ttccccaagccatggttgtttgctgagcccagttctgtggtacccatggggcaaaacgtt
accctttggtgtcaaggcccaattcgcggagtagggtacattctgcataaagaaagagat
gacacttcagcggagctctcggaaaccaccagtaatgatggggcatttcccatcactaat
atatctggtgctaccataggacgctacagttgttgctaccatcctgactggacaagccct
atcaagttacagcctagcaacaccctggaactcatagtcactggtttgcttccgaagccc
agtctatcagcccagcctggtcctgtggtagcccctggagaaaacatgacacttcactgt
gaaggggaattgcctgactcaacatatgtcctgttgaaaaagggtgtccaagagcccata
gagcaacagaagccaaatgggtataaggctgacttctggatgccatcagtgagaagtaag
gattctggaatctatagctgtgtctattatttggaaactgctccccttgcagcttccaat
cacagtgagcttctggagatctgggtgactgataagccccccaagccatctctgtcagct
tggccgaacgctgagttcaagctagggaaggacatcacattgcagtgccgaggacccctg
ccaggagttgaatttgtcctagaacatgatggagaagaagcacctcagcagttctcagag
gatggagactttgtcatcaacaatatggaaggaaaaggcattggaaactatagttgtagt
taccgcctccaggcctaccccgatatatggtcagaacccagtgatcttctggagctggtt
ggagcagcagggcctgctgctcaggagtgcactgtgggtaacattgtccgaagtagcctg
attgtggtggtggtggtagccttggggatagtgttagccatagaatggaagaagtggcct
cgactccggaccaggggatcagatacagatggaagagaccagactatcgcccttgaagaa
tgcaacctagatggggaaccagacaccaataccagctctccctcatcaacctctcggngg
acctcagtagaagtgccagtccctgtataa
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