Suncus etruscus (white-toothed pygmy shrew): 125999189
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Entry
125999189 CDS
T09902
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
125999189 (RLIM)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125999189 (RLIM)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125999189 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125999189
NCBI-ProteinID:
XP_049623195
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Position
X:complement(64661246..64678913)
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AA seq
618 aa
AA seq
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MESSDSNDKGSDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGESTE
EELLRRLQQIKEGPPPQNSDENRGGDSSDDVSNSDSIIDWLNSVRQTGNTTRSGQRGNQS
WRAVSRTNPNSGDFRFSLEINVNRNNGSQNSENENEPSTRRSGGENLDSSQRQIESSRSD
STSVRAFRSERGSTEAIMGVIPTRGQRRARSRSPDHRRTRTRAERSRSPLHSVSEMPRRS
HHNISSQTFEHSLVNETEGSSRTRHHVTLRQQISGPDLLSRGLFAASGTRNAAQGAGSSD
TSSSGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESERGG
FRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYS
DSDSEPSGPVSSRNMERAESRSGRGASGSNSSSGSSSSSSSSSSSSSSSSSSSSSSSSGE
SSETSSEVFEGSSEGSSSGSRREGRHRPPPTVTFDDGGSLPFLSLAQFFLLNEDDDDQPR
GLTKEQIDNLSMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST
CPICRRAVLTSGNRESIV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttcagattctaatgataaaggaagcgatcagtctgcagcacaacgcagaagt
caaatggacagactggatcgggaagaagctttttatcaatttgtaaacaacctaagtgaa
gaagattatagacttatgagggataacaatttactaggcaccccaggtgaaagtacagag
gaagaattgctgaggagactgcaacaaattaaagagggacctccaccacaaaactcagat
gagaatagaggtggagactcttccgatgatgtgtccaacagtgattctataattgactgg
cttaactctgtccgacaaactggaaatacaacacgaagtggacaaagaggaaaccaatct
tggagagcagtgagccggactaatccaaacagtggtgattttagattcagtttagagatt
aacgttaaccgtaacaatggaagccaaaattcagagaatgaaaatgaaccatccacaaga
cgttctggaggagagaatttggacagtagccaaaggcaaatagaaagttcacgatctgat
tccacatctgtgagagcatttagatcagaacgaggttcgactgaagcaataatgggagtt
atacctaccagaggccagagaagggcaaggagcaggagcccagaccatcgccgaaccaga
accagagctgaaagaagtaggtcacctctgcattcagtgagtgaaatgccacgacgatct
catcataatatctcatctcaaacttttgagcattctttggtaaatgagactgagggaagt
tctagaacccggcaccacgtgacattaagacagcaaataagtgggcctgatttgctaagt
agaggtctctttgcagcatctggaacaagaaatgctgctcaaggagcaggttcttcggac
acatccagcagtggtgaatctacaggatcagggcagagacctccaaccatagttcttgat
ctacaagtaagaagagttcgtcctggggaatatcggcaaagagacagcatagcgagcaga
acccggtctaggtctcagacgccaaataacactgtcacttacgaaagtgagcggggaggt
tttaggcgtacattttcacgttctgaacgggcaggagtgagaacctatgtcagtaccatt
agaattcccattcgtagaatcttaaatactggcttaagtgagactacatctgttgcaatt
cagaccatgttaaggcagataatgacaggctttggagaactaagctactttatgtacagt
gatagtgattcagagcctagtggccctgtctcaagtcgaaatatggaaagggcagagtca
cgaagtggaagaggggcttcgggtagtaatagtagttctggatccagttccagctccagc
tccagctcaagctccagctcaagctccagctccagctcaagctcaagctctagtggtgaa
agttcggaaactagctcagaggtatttgaaggcagtagtgaaggaagctcatctggtagc
aggcgagagggtcgacacaggcctccccccacagtaacatttgatgacggcggttctttg
cctttccttagcctggctcagttttttcttttaaatgaggatgatgatgatcaacctcga
ggacttaccaaagaacagattgacaacttgtcaatgagaagttttggcgaaaatgatgca
ttaaaaacctgcagtgtttgcattacagaatacacagaaggcaacaaacttcgtaaacta
ccttgttcccacgagtaccatgttcactgtattgatcgctggttatctgagaattctact
tgtcctatttgtcgtagagcagtcttaacttctggtaacagagaaagcattgtgtaa
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