Suncus etruscus (white-toothed pygmy shrew): 125999203
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Entry
125999203 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
125999203
Spliceosome [BR:
setr03041
]
Common components
Common spliceosomal components
General mRNP proteins
125999203
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
125999203
NCBI-ProteinID:
XP_049623218
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Position
X:56056199..56057970
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AA seq
527 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERRRSKSKERKQSRD
RERKTSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSRPKFNSAIRGKIGLPHSIKL
SRRRSRSKSSFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGXFGAVAEFSFVIDLQTRLSQQTEASALTAAASVQPLA
TQCFQLSNMFNPQTEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSALGNVYVKCPSIAA
AIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacatcgacatcgaagccatgctcgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgaagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaagaagaagcaaaagtaaggaacgaaagcaaagtcgagat
agagaacggaaaacgagtaaaagtcgtgaaaggaagagaagtagaagcaaagaaagaaga
cggagtcgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
agaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcaagaagcaaaagttcattcaggaaagacaagagtcctgtgagagaa
ccaatcgataatctaactcctgaggaaagagatgcaaggacagttttctgtatgcagctg
gcagcaagaattcgaccacgggacttggaagagtttttttctacagtaggaaaggttcga
gatgtgaggatgatttctgaccgaaattcaagacgttccaaaggaattgcttatgtggaa
tttgttgatgttagctctgtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcattgtacaggcatcccaggccgaaaaaaacagagctgcagcaatggcaaat
aatctacaaaagggaagtgctgggcctatgaggctttatgtgggctccttacattttaac
ataacagaggacatgcttcggggaatctttgagccttttggaaggattgaaagtatccaa
ctcatgatggatagtgaaactggtcgatctaagggttatggatttattacgttttctgat
tcagaatgtgccaagaaggctttggaacagcttaatggatttgaattagcaggaaggcca
atgaaggttggtcatgttactgagagaactgatgcttctagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaaccggtcgcctccagttaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacaacaagctctacaa
atgagtggcntctttggtgctgtggcagaattctcttttgttatagatttgcaaacaaga
ctttctcaacagacggaagcttcagctttaactgcagctgcttctgttcaaccacttgca
acacagtgcttccaactctctaatatgtttaaccctcaaacagaagaagtcggatgggat
acagagattaaagatgatgtgattgaagaatgtaataaacacggaggagttattcatatt
tatgttgataaaaattcagctctgggcaacgtgtatgtgaaatgcccgtccattgctgcg
gccattgctgcagttaatgcattgcatggcaggtggtttgctggtaaaatgataacagca
gcatatgtacctcttccaacttatcacaacctcttccctgattctatgacagcaacacaa
ctactggttccaagtagacgatga
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