Suncus etruscus (white-toothed pygmy shrew): 125999241
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Entry
125999241 CDS
T09902
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125999241
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125999241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
125999241
03041 Spliceosome [BR:
setr03041
]
125999241
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125999241
mRNA cycle factors
Common to processing body (P body) and stress granule
125999241
Spliceosome [BR:
setr03041
]
Common components
Common spliceosomal components
hnRNP proteins
125999241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
HnRNPA1_LC
Nup35_RRM_2
OB_RNB
RRM_3
Motif
Other DBs
NCBI-GeneID:
125999241
NCBI-ProteinID:
XP_049623274
LinkDB
All DBs
Position
X:48683644..48684737
Genome browser
AA seq
322 aa
AA seq
DB search
MMSKFVSCKEPEQMRKIFIGGLSFETTDESLRSYFEQWGTLTDCIVMRYPKSKRSRGFGF
VTYATVEAVDAVMNARPHKVDGRFVEPKRAISKEDSQIPGAHLTVRKIFVGGIKEDTEEQ
HLRKYFEQFGNIEMVDIITDQESGKSRGFAFVTFDDHDSVDKIVIQKNHIVNGHNCEIRK
ALSKQEMVRVSSSQRGSGGSGSFSGSHGGNFSGNPNFIYGGSFCGQGGYGGSENAGVYSG
SRFDYHGSGDYGTNFLSGTYNIPYSHFGPMKRGKFGGPNSGPYGCYGQHFLRTSNKGRYR
GSRSGRKFYLPRNLNRRGKPEK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctaagtttgtgtcttgcaaagaacctgaacagatgcggaaaatctttattggt
gggttgagctttgaaacaactgatgaaagtctgagaagctattttgaacaatggggaaca
ctcacagactgtattgtaatgagatatccaaaatccaagcgctccagaggttttgggttt
gtcacatatgccactgtggaggcagtggatgcagtcatgaatgcaaggccacacaaggta
gatggaagatttgtggaaccaaagagagctatttcaaaagaagattctcaaatacctggt
gcccacctaactgtgagaaagatttttgttgggggcatcaaagaagacactgaagagcaa
catctaagaaaatattttgagcaatttgggaatattgaaatggttgacatcataactgac
caagagagtgggaagagtagaggttttgcttttgtgacttttgatgaccatgattctgta
gacaagattgttattcaaaaaaatcatattgtgaatggccataactgtgagataagaaaa
gccttatctaagcaagagatggttagggtttcatccagccaaaggggttcaggtggttct
ggaagctttagtggcagccatggtggtaattttagtggaaatcccaactttatttatgga
ggaagcttctgtggacaaggtggatatggtggcagtgaaaatgctggtgtatatagtggc
agtaggtttgattatcatggatctggtgattatggaaccaattttctaagtggtacttac
aatattccatattcacattttggacccatgaagagaggaaaatttggtggcccaaactca
ggtccctatggttgttacggccaacactttttgaggacaagtaacaaaggtcgctatcga
ggttccagaagtggcaggaagttttatttgccaagaaatcttaacaggagaggaaagcca
gagaagtga
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integrated database retrieval system
