KEGG   Suncus etruscus (white-toothed pygmy shrew): 125999308
Entry
125999308         CDS       T09902                                 
Name
(RefSeq) elongin-C-like
  KO
K03872  elongin-C
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04066  HIF-1 signaling pathway
setr04120  Ubiquitin mediated proteolysis
setr05170  Human immunodeficiency virus 1 infection
setr05200  Pathways in cancer
setr05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125999308
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    125999308
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125999308
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    125999308
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    125999308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:setr04121]
    125999308
   03400 DNA repair and recombination proteins [BR:setr03400]
    125999308
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     125999308
   Cul5 complex
     125999308
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125999308
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 125999308
NCBI-ProteinID: XP_049623343
LinkDB
Position
X:complement(52298590..52299107)
AA seq 112 aa
MDGEEKTYRGCKGPDAMYVKLKSSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTKIPEFPIAPEIALELLMAAIFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggagaagagaaaacctatcgtggctgtaaaggccctgatgctatgtacgtcaaa
ttaaaatcctctgatggccacgagtttattgtaaaaagagaacatgcattaacatcggga
acaataaaagccatgttgagtggcccgggtcaatttgctgaaaatgaaaccaatgaagtc
aattttagagagatcccttcacatgttctatccaaagtatgcatgtattttacctacaag
gtccgctacactaacagctcaaccaagattcctgaattcccaattgcacctgaaattgca
ctggaactgctgatggctgcgattttcctagattgttaa

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