KEGG   Suncus etruscus (white-toothed pygmy shrew): 125999314
Entry
125999314         CDS       T09902                                 
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B isoform X1
  KO
K03064  26S proteasome regulatory subunit T4
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03050  Proteasome
setr05010  Alzheimer disease
setr05012  Parkinson disease
setr05014  Amyotrophic lateral sclerosis
setr05016  Huntington disease
setr05017  Spinocerebellar ataxia
setr05020  Prion disease
setr05022  Pathways of neurodegeneration - multiple diseases
setr05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    125999314 (PSMC6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    125999314 (PSMC6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125999314 (PSMC6)
   05012 Parkinson disease
    125999314 (PSMC6)
   05014 Amyotrophic lateral sclerosis
    125999314 (PSMC6)
   05016 Huntington disease
    125999314 (PSMC6)
   05017 Spinocerebellar ataxia
    125999314 (PSMC6)
   05020 Prion disease
    125999314 (PSMC6)
   05022 Pathways of neurodegeneration - multiple diseases
    125999314 (PSMC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:setr03051]
    125999314 (PSMC6)
Proteasome [BR:setr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     125999314 (PSMC6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 AAA_22 AAA_5 RuvB_N PRS7_OB nSTAND3 Prot_ATP_ID_OB_N AAA_14 DUF815 AAA_7 AAA_11 TIP49 AAA_33 RNA_helicase TPR_MLP1_2 AAA_3 NPHP3_N Csa3_N AAA_18 Mg_chelatase bpMoxR DUF3829_2nd AAA_28 DUF5906 AAA_lid_PRS2_C TsaE AAA_24 NACHT ATPase AAA_25 Occludin_ELL AAA_17 ATPase_2 Parvo_NS1 IstB_IS21 DUF4140 Med4
Other DBs
NCBI-GeneID: 125999314
NCBI-ProteinID: XP_049623350
LinkDB
Position
2:complement(38004374..38028148)
AA seq 403 aa
MALPSIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcccttcccagcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctggaacacaaggagatcgacggccgtctc
aaggagctaagagaacaattaaaagaacttaccaaacagtatgaaaagtctgaaaatgat
ctgaaggccctacaaagtgttggacagattgttggtgaagttctcaagcagttaactgaa
gaaaaattcattgttaaagccacaaatggaccaagatatgttgtgggttgtcgtcgacag
cttgacaaaagtaagctgaagccaggaacaagagttgctctggatatgactactttaact
ataatgagatatttgccaagagaggtggatccactggtttataacatgtctcatgaagat
cctggaaatgtttcttattctgagatcggagggctgtctgagcagattcgggaattgaga
gaggtgatagagttacctcttacaaacccagaattattccaacgtgtaggaataattcct
ccaaaaggctgtttgttatatgggccaccaggtacaggaaaaacgctcttggcacgagct
gttgctagtcagctggattgcaattttttaaaggttgtatctagttctattgtagacaag
tatattggtgaaagtgctcgtttgatcagagaaatgtttaattatgccagagatcatcag
ccatgcatcatttttatggatgaaatagatgctattggtggacgtcggttttctgagggt
acttcagctgacagagagattcaaagaactttaatggagttgctaaatcaaatggatgga
tttgacactctacatagagttaaaatgatcatggctacaaatagaccagatacattggat
cctgctttgcttcgtccaggaagattagatagaaaaatacatattgatttgccaaatgaa
caagcaagattagatatattgaaaatccatgcaggtcccattacaaagcatggtgaaata
gattatgaagcaattgtgaaactttctgatggttttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagtacaggaagac
tttatgaaagcagtcagaaaagtggctgattctaagaaactagagtctaaattggactac
aaacctgtataa

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