Suncus etruscus (white-toothed pygmy shrew): 125999346
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Entry
125999346 CDS
T09902
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
125999346 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
Other domain-containing proteins
Patched domain-containing proteins
125999346 (PTCHD1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
125999346
NCBI-ProteinID:
XP_049623378
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Position
X:complement(1600543..1658285)
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AA seq
888 aa
AA seq
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MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEDSVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTKIQVPRPGFNYTFAHICVLNNDKSCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHIKDRVKSAEAVQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKLNSKVKIYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLASLTAAGIINLTGGKYNSTFLGVPFIMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLTFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPDVLQEKPAWYRFLLTARFSEDTTDGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVILFYLIYISFALMGYLQVSEGSDLSNIVATATQTID
YTTAQQKYFSNYSPVIGFYIYESIEYWNATVQEDVLEYTKGFVRISWFDSYLNYLRKLNV
STDLPKKNFTDMLRNSFLKTPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETKKEE
LYNLLETLRRLSVTSKVKFIVFNPSFVFMDRYAASLGAPLHNSCISTLFLLFFSAFLVAD
SLINVWLTLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
LTRTKWVKNSLEVHGVAILQSYLCYLVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggctcggccacttc
attgccagtcacccggtcttcttcgcctcggcgcccgtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaggacagcgtcgagcacctgctggcgccccagcac
agcctggccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccggctctactcggaccttcagactcccggccgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccaacatcacaccgacctgatcttaaagttgcatgct
gctgtgaccaagatccaggttccaagacctggctttaattacacatttgctcacatatgt
gtcctgaataatgataaatcctgcattgtggatgacatcgtgcatgttctggaggagctc
aagaatgcccgggccaccaaccggaccaactttgctatcacatacccaatcacccacttg
aaggatgggcgagcagtctacaatgggcaccagcttggtggcgtcacagtgcacatcaag
gaccgagtgaaatctgcagaggccgtccagctcacctactacctgcagtcaatcaacagt
ctcaacgacatggtagctgagaggtgggaatccagcttctgtgacactgttcgcctgttc
cagaaattaaacagcaaagtcaaaatatacccttacacgtcctcctcactgagggaagat
tttcagaagaccagccgtgtgtcagaacgttacctggtcaccagcctgatcctggtggtc
accatggctatcctttgctgctctatgcaggactgcgtccgcagcaaaccctggttaggc
ctgcttgggttggtgaccataagcctggccagtctcactgcggctgggatcatcaatctt
actggtgggaaatataattccaccttcctgggagtccctttcatcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggagaaaaactagagaagaccaacatgtt
aaagagagaactgcagaagtctatgcagactccatgctcaccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatctttttcaactacctctatgtactctcgttt
tatggttccagtctggtattcactggctatatagaaaacaattaccagcatagtatcttc
tgtagaaaagtcccaaagcctgatgtactgcaggagaagccggcatggtataggtttctc
ctgacagccagatttagtgaggacacaactgatggagaggaagcgaacacttacgagagt
cacttattggtatgtttcctcaaacgctactactgtgactggataaccaacacctatgtc
aagccttttgtaattctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaaccgcaacgcaaaccattgac
tacactactgcccagcaaaaatactttagcaactatagtccagtgattgggttttacata
tatgagtctatagagtactggaatgctactgtccaagaagatgtgttggaatacaccaag
gggtttgtccggatatcctggtttgatagctatttaaattaccttcggaaactcaatgtg
tccactgacttgcctaagaaaaatttcacagacatgttgagaaattccttcctgaaaaca
cctcaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaggtt
gatgtagtggcatccagaatgtttctggtggccaaaaccatggaaacaaagaaagaagaa
ctatataatctcctagaaaccctgaggagactctctgtcacctccaaagtgaagtttatt
gtctttaacccgtcctttgtgttcatggatcgatatgcagcctctctgggagcccccctg
cacaactcctgcatcagtacattgttcttgctcttcttctcagcattcctggtggcagat
tctctgatcaatgtttggctcacactcactgttgtatccgtagagtttggagtgataggt
tttatgacattatggaaagtagaactggactgcatttctgtgctatgcttaatttatgga
attaactacacaattgataattgtgctccactgttatccacatttgttctgggcaaggac
ttaacaagaacaaaatgggtgaaaaactccctggaagtgcatggggtagctattttacag
agctacctctgctatcttgttggtctgattcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccatctaagaaaaaaaggaaagagaagaaa
aatcctgaaaatcgggaagaaattgagtgtgtagaaatggtggatattgatagtaccaga
gtggttgaccaaattacaacagtgtga
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