Suncus etruscus (white-toothed pygmy shrew): 125999419
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Entry
125999419 CDS
T09902
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
125999419 (AFF2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125999419 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
125999419
NCBI-ProteinID:
XP_049623425
LinkDB
All DBs
Position
X:88669055..89263021
Genome browser
AA seq
1313 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRTALKKREWERRNQEVQQEEDLFSSGFDLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQNHLVGIPKNSVPQTPVNKNETSFFPEQKNRMIS
SHQDNTHSSSSAPMPPPSVVILNSTLIHSNRKAKPEWPRDNHNANVLSANQAGIPPNKMQ
TSTQEQPPARLEDFFVYPAEQSQVGAVQDSNPSTKEDGALKTSGAEAFKEIFQSNSPEES
EFTVQAPGSPLVASSLLAPSSGLLVQNFPTGLYCKTSMGQQKPTAYVRPMDGQDQAPDIS
PTLKPSIEFENSFGNLTFGSLLDGKPSAASAKTKLPKFAVLQTNEVSLPSDPSCVEEILR
EMTTSWPPPLTAIHASGNSEQNPFCTPAQEPQHLNPGFALQKWSDPTSRASTKMLEDDLK
LSSDEDDLEPVKTLTTQCTATELYQAVEKAKPKNNAVNTLLTSPSSPPAMQGSGGAGSSS
DSESSSESDSDTESSTTDSETNEAPRVTTPEPDPPSTNKWQLDKWLNKVTSQNKSFICGQ
NETPMETISIAPPTIQPMEVPIKMKTTPSQALPEPKERPLMGLIREKARPRPTQKAPETK
AVKHKLSVSLDTVSQRTTGKKQPKKNEKNTSLEEMTWPKPNIPSSTPKEKESLALELPEP
PRGRNKTTVHKPVPRKEPRPNITVAAEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEE
NLQVKVLPPCVVPGAHPAKSKETNLSLGTLLNHSSSSSSSNIPINHEEPIFSPSPLAQTE
LLSPLQEPEHPKNLWVKIDLGLLSRVPGSNSAQAAAAKPDHKETASKPRRPSAAASATSA
TATAAERPATKGKRKHKPTEVAEKIPEKKQRVEENTICLLPPCISPAPPHKPPNTKENNS
SRRANRRKEEKLFPPPLSPLPDDPPRRRNVSGSSGPFSQDKSIPMIGQITSTKPKRNEGK
FCSTFKGIPINDGDTTRKTTSTSVAVSNPAITAAIINSTALISAPVTATATTTATATTTT
TTTTISTITSTITPGLMDSSHLEMATWAALPLLSSSTTNVRRPKLTFDDSVHNADFYMQE
AKKLKHKADALFEKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAM
RLKNFASPLASDGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQ
IPSPWVGNGKNTPSPVSLNNVSPINAMGNCNNGPITIPQRIHHMAASHVNITSNVLRGYE
HWDMADKLTRENKEFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttccgggactgggacttggagcagcagtgtcactacgaacag
gatcgcactgcccttaaaaaaagggagtgggagcgaaggaatcaagaagtccaacaagaa
gaggatctcttttcttcaggctttgatctgttcggcgagccctacaagacaaacaagggt
gatgcccttgccaaccgagtccagaatacgctgggaaattatgatgaaatgaaggatttg
ctaactaaccattctaatcagaatcatctagtgggaatcccaaagaattctgtgccccag
actcccgtcaacaaaaatgaaaccagtttttttccagaacaaaagaatcgaatgatctca
tctcaccaagacaacactcactcctcctcttcagcaccaatgcctccaccttctgttgta
atactgaattcaactttaattcacagcaacaggaaagccaaaccagagtggccacgagat
aatcataatgctaatgttctatcagccaaccaggctggtattccgccaaacaaaatgcag
acatctacccaggagcagcccccagccagactggaagacttctttgtctacccagcagaa
caatctcaagtgggagcagtccaagattcaaatccatctacaaaggaagatggtgctctc
aagaccagtggagcagaagctttcaaagaaatctttcagtccaactcacccgaagaatct
gaatttacagtgcaagcacctgggtctcccctagttgcctcctccttgttagctcccagc
agtggtcttttggttcaaaattttccaacagggctctactgcaaaactagcatggggcag
caaaaaccaactgcgtatgttagacctatggatggccaagaccaggccccggacatttct
ccaacactgaagccgtctattgagtttgagaacagttttgggaatctgacatttggatca
ctcttggatggaaaacccagtgctgccagtgcaaagacaaaactgccaaagtttgcggtt
ctccaaacaaacgaagtgagccttcccagtgatccaagctgtgtggaagaaatcttacgg
gagatgaccacttcctggcctcctccactcacggccatacatgcttcaggaaactctgag
cagaacccattttgcacgccagcacaggaaccacaacatctgaacccaggatttgcctta
caaaagtggagtgacccaaccagcagagcttctacaaagatgcttgaggatgacctgaaa
ctaagcagcgatgaagatgaccttgagccagtgaagacgttgacaactcagtgtacagcc
accgagctctatcaggctgttgaaaaggccaaacctaagaataatgctgtgaacacacta
ttgacctcaccttcatctccacctgcaatgcaaggttctgggggagcaggcagttccagt
gactcggagagcagttcagagtcggactctgacactgaaagcagcaccacggacagcgag
accaatgaggctcctcgtgtgaccactccagagcctgatccaccctcaacaaacaagtgg
cagttggataagtggcttaacaaggtgacatctcagaataagtcctttatttgtggtcaa
aatgaaacacccatggaaacgatttctatagctccaccaaccatccagccaatggaagtt
cccatcaaaatgaagacaacccccagccaggccctgcctgaacccaaagaacggcctctt
atgggacttatcagggagaaagctcgcccacggcccacccagaaggctccagaaacaaag
gctgtgaagcacaagttgtctgtctcactggacacagtttcccaaaggacaactgggaaa
aaacagcccaaaaagaatgagaagaataccagccttgaggagatgacctggcccaaacca
aatattcccagcagcactcccaaagagaaagaaagcctagccctggagcttcctgagccc
cctagaggccgcaacaaaaccactgtccacaagcctgtgccaaggaaagaacccaggccc
aacatcaccgtggctgctgagaaaaagaaatacagggggcctagcaagattgtgccaaag
tcccgtgaattcattgaaacggattcgtcgacatcagattcgaacactgatcaggaagag
aacctgcaggtcaaagtcctgcctccttgtgttgtccctggggctcatcctgccaaatcc
aaggagaccaacctgtccctgggcaccttactcaatcacagcagcagcagcagcagcagc
aacatacccatcaatcatgaggagccaattttttcaccgagccctcttgcacaaaccgag
ctgttatctcctctgcaagagcccgaacatccaaaaaatctctgggtaaagattgacctc
ggcttgctttctcgagttcctggctccaactcagcccaagcagctgcagccaagccagac
cacaaggaaactgcctcaaaacccaggcgtccatctgcagctgcctctgccaccagtgcc
actgctactgctgctgaaagacctgccaccaagggcaaacgcaagcacaagccaacagaa
gttgccgagaagatccctgagaagaagcagcgtgtggaagagaacactatctgcctgctc
cctccttgcatctcgccagctccaccccacaagcctcctaacactaaagaaaacaattca
tccaggagagcaaatagaagaaaagaagaaaagctgtttcctcctccactttcccctctg
ccagacgatccgccacgccgcaggaatgtcagtggcagtagtggccccttcagtcaagac
aaaagcattcctatgattggacagatcacctctaccaaacctaagaggaatgaaggcaaa
ttctgctcaactttcaaagggatacccataaatgatggagacactaccagaaagacaact
tcgaccagcgttgctgtcagcaaccctgctattaccgctgccataatcaattctactgcc
ctcatctcagcccctgtcacagccactgccaccactactgcgacagccactacgacaact
actaccactaccatttccaccataacctccaccatcaccccaggcctcatggacagcagc
cacctggaaatggcgacctgggcagccttacccctgttgtcaagcagcaccacaaatgtt
cgacgacccaagctcacttttgatgactcggttcataatgctgatttttacatgcaagaa
gctaaaaagctgaaacacaaagcagatgcactgttcgagaaatttggtaaagctgtgaat
tatgcggatgcagccctgtcgttcaccgagtgtggcaatgcgatggagcgtgacccactg
gaagccaagtctccttataccatgtactccgagactgtggagctgctcaggtatgcaatg
aggctgaagaacttcgcgagtcccttggcttcggatggagacaaaaagctggcagtcttg
tgctaccgatgcttgtcacttctctacttgcgaatgtttaaactgaagaaggaccatgct
atgaagtattccagatcactgatggaatattttaagcaaaatgcttcaaaagtcgctcag
ataccatctccctgggtgggcaatggaaaaaacactccatcaccagtgtctctcaacaac
gtctctccaatcaacgccatgggcaattgtaacaatggccccatcaccattcctcaacgc
attcaccacatggctgccagtcatgtcaacatcacaagcaatgtgctccggggctatgag
cactgggacatggcagacaaactgacaagagagaacaaagaattctttggagatctggac
acgctcatggggcctctgacgcagcacagcagcatgaccaatcttgtccgttacgttcgc
cagggactgtgttggctacgcattgatgcccacttgttgtag
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