Suncus etruscus (white-toothed pygmy shrew): 125999421
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Entry
125999421 CDS
T09902
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04360
Axon guidance
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125999421 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125999421 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
125999421 (L1CAM)
04090 CD molecules [BR:
setr04090
]
125999421 (L1CAM)
04091 Lectins [BR:
setr04091
]
125999421 (L1CAM)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
L1 family
125999421 (L1CAM)
CD molecules [BR:
setr04090
]
Proteins
125999421 (L1CAM)
Lectins [BR:
setr04091
]
I-type lectins (Siglecs)
125999421 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Bravo_FIGEY
Ig_5
Izumo-Ig
BiPBP_C
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
125999421
NCBI-ProteinID:
XP_049623430
LinkDB
All DBs
Position
X:complement(94349452..94367353)
Genome browser
AA seq
1152 aa
AA seq
DB search
MEPPVITAESPRRMVVFPTDEISLKCEARGTPQVQFRWTRDGVHFKPQEEVGVTVHQAPH
SGSFTITGNNSNFAQRFQGTYRCFASNKLGTAMSQEMRLMAEGAPKWPKETVKPIEVEEG
ESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHLDYICHA
HFPGTRTIIQKEPIDLRVKATNSMIYRKPRLLFPTNSSSTVVALQGQPLILECIAEGFPT
PSIKWLRLSGSMPSDRVIYQNHNKTLQLLNVSEEDDGKYRCLAENSLGSARHDYEVVVEA
APYWLRKPQNELYAPGETARLDCQVQGRPQPQVTWRINGIPVNELAENQKYQIQQGPLSN
LVLSNLQPSDSMVTQCEARNPHGVLLANAYIYVVQLPTKILTADNETYLAVEGSSTYLLC
KAFGAPVPSVQWLDQEGKSVLQDDRFFPYANGTLGIRDLHINDTGHYFCQAANDQNNVTI
VANLQVKAATRITQGPRSAIEKKGSRVTFSCHVTFDPSLQARITWRGAGRDLQDPGDREK
YHIYDGHLVIYNLDYSDQGNYSCVASTKLDTVESQAELLVVGSPGPVPRVQVVDRNLADK
NKVQLTWSPADDHNVPIEKYHVEFQDKEKEPEKWLYLGRVAGNETFGTFDLSPYIHYTFR
VTAINKYGPGEPSPDSDETVLTPEAAPQQNPKGVKGEGNQTDNMIITWQPLKWTEWNAPQ
LQYRVQWRLQGSRGPWEEQTVDQPFLVVSNTSTFVPYEIRVQSVNRQGKGPEPQVTVGYS
GEDYPQARPKLEDIETVNSSTVLVRWWPVEPATVRGHLRGYNVTYWWVGSQQRFSKRHTH
RDHVVVPANTTNATLGGLRPYSSYSLELRVFNGRGLGPATEQTFQTPEGVPGQPEALHLE
CLSNTSLQLQWKPPVHHNGVLTGYLLTYQPLDDGGKKVPPLALEDPNINKTNLTSLSPHL
RYRFQLQATTREGAGIAIEREGGTMAVSGTLDFGNISAIAGENYSVVSWVPKEGQCNFAF
KILFKAVGNEKEKVAEQSVSYNQKSYTQWDLQPDTEYEIRLFKESELLHKMAVRTNGTSL
VPLTPTGFATKGWFIGFVCAIILLLLILLILCFIKRSKGGKYSVKDKEDTQVDSEARPMK
DETFGEYRSLER
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcctgtgatcacggctgagtctccacggcgcatggtggtctttcccactgat
gaaatcagcctcaagtgtgaggcccgagggacacctcaagttcagtttcgctggactcgg
gatggtgtccacttcaaaccccaggaggaagtgggggtcacagtgcaccaagcaccccac
tcgggatccttcaccatcacgggcaacaacagcaattttgcacagaggttccagggcacc
tatcgctgctttgccagcaacaaattgggcactgccatgtcccaggagatgaggcttatg
gccgagggtgcccccaagtggcccaaggagacagtgaagcccattgaggtagaggaaggc
gagtcagtagttctgccttgccacccaccacccagcgcagagccacttcgcatctactgg
atgaatagcaagatcttgcacatcaaacaggatgagcgtgtgaccatgggtcagaatggc
aacctgtacttcgccaacgtgctcacatcagacaaccacttggattatatctgccatgcg
cacttccctggcacccgcaccatcattcagaaggaacccattgaccttcgagtcaaggcc
accaacagcatgatctatcggaagccgcgtcttctctttcccaccaactccagcagcact
gtggtagccttgcagggccagccgctcatcctggagtgcattgctgagggcttccccacg
cccagcatcaagtggcttcggctgagcggctctatgcccagtgaccgcgtcatctatcag
aaccacaacaagacactgcagctactgaacgtgagtgaggaagatgatggcaaataccgt
tgcctggctgagaactccctggggagtgcccggcatgactacgaagtcgtcgtggaggct
gctccgtattggctgcgcaagccccaaaatgagctgtacgcaccaggagaaacggcccgc
ctggactgccaagtacaaggccggccccagccacaggtcacctggaggatcaacgggatc
cctgtcaatgagctggctgagaaccagaagtaccaaatccagcaagggcccctcagcaac
ctggtcctgagcaacctgcaacccagcgactccatggtgacccagtgtgaggcccgcaat
ccgcatggggtcttgctggccaatgcatacatctacgtcgtccagctgccaaccaagatt
ctgacagcagacaacgaaacatacctggcggtagagggcagcagtacctacttgctgtgc
aaagcctttggggcccctgtgcccagtgtccagtggctggaccaggagggcaagagcgtg
ctgcaggatgaccgcttcttcccctatgccaatggcaccctgggcatccgtgacctgcac
atcaatgacactggtcactacttctgtcaggcagccaatgaccagaacaatgtgactatt
gtggctaacctgcaggtcaaagctgccacacgaatcacgcaggggccccggagtgccatt
gagaaaaaaggctcaagagtcacgttttcgtgccatgtcacctttgacccatccttgcaa
gctcggatcacctggcggggggccggccgtgacctgcaggaccctggggacagagagaag
taccacatatatgatgggcacctggttatctataacctggactacagtgaccaaggcaac
tacagctgtgtggccagcaccaagctggacacagtggagagccaggctgagctcctggtg
gtggggagcccaggcccagtgccccgagtccaggtggttgaccggaacctagcggataaa
aacaaggttcagctgacctggagccctgcagatgaccacaatgtgcccattgaaaagtat
cacgtcgagttccaggacaaggaaaaggagcccgagaaatggctctacctgggcagagta
gctgggaatgagaccttcggcaccttcgatctgtccccctacatccattacactttccga
gtcactgccatcaacaagtacggcccaggcgagcccagcccagactctgatgagactgtg
ctcacaccggaggctgcccctcagcagaaccccaagggcgtaaagggtgaaggaaaccag
actgacaacatgatcatcacttggcagcctcttaagtggacggagtggaatgcacctcag
ctacagtaccgtgtccagtggcgtcttcagggctctcgggggccgtgggaggagcagaca
gtggaccagccattccttgtggtgtccaacacttccacctttgtgccctacgagatcagg
gtgcagtcagtgaacagacagggcaagggtcccgagccccaggttactgtgggctactca
ggcgaggactaccctcaggcacgcccaaagctggaagacattgagactgtgaactccagc
actgtgctggtcagatggtggcctgtggaaccggcaacagtcagggggcacctgcgggga
tacaatgtgacatactggtgggtgggcagtcagcagaggttcagtaagaggcacacgcac
cgagaccatgtggtggtgcccgccaacaccacgaatgccaccctgggcggcctgcgtccc
tacagttcctactccctggagctacgggtcttcaatggccgaggcctggggcctgccact
gaacagaccttccagacacccgagggagtgccaggccagccggaagcactgcatctggag
tgcctatcaaataccagcctgcagctgcaatggaagccccctgtccatcacaatggggtg
ctcactggctacttgctcacctaccagcctctggatgatgggggcaagaaggtgccgccc
ttggccctggaggaccccaacattaataaaacaaacctcaccagcctcagtcctcacctg
cgctaccgctttcagctgcaggccaccacaagggagggggccggcattgccatcgagcgt
gaggggggcaccatggccgtgtctgggaccctggattttggaaatatttcggccatcgca
ggagagaattacagtgtggtctcctgggtgcccaaggagggacagtgcaacttcgcattc
aaaatcttgttcaaagctgttgggaatgagaaggagaaggtggcggagcagtccgtcagc
tacaaccagaagtcatacacacagtgggacctgcagcctgacactgaatatgagatacgt
ctgttcaaggagagtgaacttttgcataagatggctgtgagaaccaatggcaccagcctc
gtgccactcacaccaactggctttgccaccaagggctggttcatcggcttcgtgtgtgcc
atcattctcctgcttctcatcttgctcatcctctgcttcatcaagcgcagcaaaggcggc
aagtactcagtgaaggacaaagaagacacgcaggtggactcggaggcccggcccatgaag
gatgagacatttggggagtacagatccttggagaggtaa
DBGET
integrated database retrieval system
