Suncus etruscus (white-toothed pygmy shrew): 125999429
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Entry
125999429 CDS
T09902
Symbol
ABCD1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
setr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125999429 (ABCD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125999429 (ABCD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
125999429 (ABCD1)
Enzymes [BR:
setr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
125999429 (ABCD1)
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
125999429 (ABCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
SMC_N
Rad17
Cyto_heme_lyase
PspB
AAA_22
Adeno_IVa2
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
125999429
NCBI-ProteinID:
XP_049623444
LinkDB
All DBs
Position
X:94244907..94258681
Genome browser
AA seq
738 aa
AA seq
DB search
MPVLSTPRASRVSTLKRSAVILALTAYGAHKIYPLLRQCLAPARDPQEPPTAGVTIKGTS
AAKAGVNRAFVQRLLWLLRLLFPRLLCRETGLLALHSATLVSRTFLSVYVARLDGRLARC
IVRKDPRAFGWQLMQWLLIALPATFINSAIRYLEGQLALAFRSRLVSHAYSLYFSQQTYY
RVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTAYTLVRAARSRGAGTA
WPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVTNSEEIAFYGGHEV
ELALLRRSYQDLASQINLILLGRLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYSDSD
SEAVKKAALAMKEEDLVSERTEAFTIARNLLTAAADAIERIISSYKEVTELAGYTARVHE
MFQVFHDVRHCHFKRPGDPEDVPAGSRTMVRSGIRMEGPLQIQGRVVDVEKGIICENIPI
ITPTGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYGGVLYKPPPQRMFY
IPQRPYMSVGSLRDQIIYPDSEEAMRRKGCSEQQLEAILDTVHLRHILQREGGWEAVCDW
KDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGEIFQAAKDAGIALLSITHRP
SLWKYHTHLLQFDGEGGWKFEKLDSAARLSLTEERQRLEQQLAGVPKMQQRLRELRQILG
QDQSRSPEAEGAEPIAVS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctgtccacgccccgagcctctagggtgagcacgctcaagcgcagtgccgtg
attctggccctcacggcctatggagcccacaaaatctacccgctcctgcgccagtgcctg
gccccggccagggacccgcaggagccaccgacggcgggagtgaccatcaaagggacctca
gcggccaaggctggcgtgaaccgggccttcgtgcagcgactgctgtggctcttgaggttg
ctctttcctaggcttctgtgccgggagacagggctgctggccttgcattcagccacgctg
gttagccgaacttttttgtcggtgtacgtggcccgcctggacggacggctggcacgctgc
attgtgcgcaaggacccacgggcctttggctggcagctcatgcagtggctgctcatcgca
ctcccagccaccttcatcaacagtgctatccgctacctggagggccaactggccctggcc
ttccgcagccgccttgtgtctcatgcctacagcctctacttttcccagcagacctattac
cgcgtcagcaacatggacggccggctgcgcaaccctgaccagtcactgacggaagacgtg
gtggcctttgctgcctcagtggcccacctctactccaatctgaccaagcctctgctggac
gtggccgtaacggcctacaccttggtcagggcggcccgctcccgtggggcaggaactgcc
tggccctctgcgatcgctggcctcgtggtgttcctcacggccaatgtgctgcgagccttc
tcgcccaagtttggggagctggtagccgaggaggcgcggaggaaaggggagctgcgctac
atgcactcacgcgtggtgaccaactctgaggagatcgccttctatgggggccacgaggtg
gagctagccctgctccggcgctcctaccaggacctcgcttcacagatcaacctcatcctg
ctgggccgcctgtggtatgtcatgttggagcagttcctcatgaagtacgtgtggagcgcc
tcaggcctgctcatggtggctgtccccatcatcactgccaccggctactcagactcagac
tcagaagccgtgaaaaaagcagccttggctatgaaggaggaggacctggtgagtgagcgc
actgaggccttcaccattgcccgcaacctcctcacggctgcagcggatgccattgaacgc
atcatttcctcatacaaggaggtgacagagttggctggctacacggcccgtgtgcacgag
atgttccaggtcttccacgacgtccggcactgccatttcaagaggcctggggaccctgag
gatgtgccagctgggtcccggaccatggtgaggtctggtatccgtatggagggacctctg
cagatccaagggcgagtggtggatgtggagaagggcattatctgtgagaacatccctatc
atcacgcccacaggagaggtggttgtggccagcctcaatatccgggtggaagagggcatg
cacctgctcatcactggccccaatggctgtggcaagagctccctgttccggatcctaggt
gggctgtggcccacatatggcggggtgctctacaaacccccaccacaacgtatgttctac
attccacaaagaccctatatgtcggtgggctccctgcgtgaccagatcatctaccctgac
tcggaggaggccatgcggcggaagggctgctcagagcagcagctcgaggccatcctggac
actgttcacctgcgccacatcctgcagcgggaaggaggttgggaggctgtgtgtgactgg
aaggacgtcctgtcagggggtgagaaacagcgcatcggtatggcccgcatgttctaccac
aggcccaagtacgccctcctggatgagtgtaccagtgccgttagcatcgatgtggagggt
gaaatcttccaggcagccaaggatgcaggcatcgcactgctttccatcacgcaccggccc
tccctgtggaagtaccatacacacctgctgcaatttgacggagagggtggctggaagttc
gagaagctggactctgcagctcgcctgagcctgacggaggagagacagcggctggagcag
cagctggctggggtccccaagatgcagcagcgcctgcgggagctgagacagatccttggc
caagaccaaagccggagccctgaagcagaaggggctgagccaattgctgtctcctga
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