KEGG   Suncus etruscus (white-toothed pygmy shrew): 125999499
Entry
125999499         CDS       T09902                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03420  Nucleotide excision repair
setr04120  Ubiquitin mediated proteolysis
setr05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125999499 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125999499 (CUL4B)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    125999499 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:setr04121]
    125999499 (CUL4B)
   03400 DNA repair and recombination proteins [BR:setr03400]
    125999499 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:setr04147]
    125999499 (CUL4B)
Ubiquitin system [BR:setr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     125999499 (CUL4B)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125999499 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125999499 (CUL4B)
Exosome [BR:setr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125999499 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 125999499
NCBI-ProteinID: XP_049623515
LinkDB
Position
X:116293873..116323991
AA seq 898 aa
MFPTGLSSPHASAAAAPEVRAAPDANPGTPPGTPARKRKLSRGGSSSSSHEREDLESASS
SSSAASTPRDAASPAASALACLGVAGASTSHAPAVPKKLRFDDTLEFVGFDPKMAEESSS
SSSASSPSAAAPQQQQQQQQLKNRSLLMSSVPSAPHTNGLTKATTVSSFAASKPGSAKKL
VIKNFKDKPKLPENYTDETWHKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLY
KQLRQICEDHIKSQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQ
NSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSD
LQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQ
KSLIATVEKQLLGEHLAAILQKGLTNLLDENRIQELSLLYQLFSRVRGGVQVLLQQWIEY
IKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFMKNEKFINAMKEAFETFINKRPN
KPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLV
GKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQVRYMQNQNVPGNI
ELTVNILTMGYWPTYIPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAD
FKEGKKELQVSLFQTLVLLMFNEGEDFSLEEIKQATGIEDGELRRTLQSLACGKARVLAK
YPKGKDIEDGDRFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIV
RIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtctctcttccccccacgcctcagccgctgccgccccggaggtccga
gccgcccccgatgcgaaccccggcacccctccaggcacccctgccaggaagagaaagttg
agccgcggcggcagcagcagcagcagccacgagcgcgaggacttggagtccgcctcgtcg
tcctcgtccgccgcctccacgccccgcgacgccgcctccccggccgcctcggccctcgcc
tgcctcggcgtggccggggcctccaccagccacgcgccggccgtgcccaagaagctccgc
ttcgacgacacgctggagttcgtgggcttcgacccgaagatggccgaggagtcctcctcg
tcctcctccgcctcgtcgcccagcgccgccgccccgcagcagcagcagcagcagcagcag
ctgaagaaccggagcctgctgatgtcgtccgtgccttcggcgcctcacaccaacggcctc
accaaagccaccaccgtgtccagctttgccgccagcaagcccggctcggcgaagaagtta
gtcatcaagaactttaaagataagcctaaattaccagaaaactacacagatgaaacatgg
cataaacttaaagaagcagtagaagctatccagaatagtacttcgattaagtacaattta
gaagaactctatcaggctgtggaaaatctgtgctcttacaagatttctgccaacttgtac
aaacagctgagacagatttgtgaagatcacatcaaatctcaaattcaccagttcagagag
gattcgttggatagtgttcttttcctgaagaagatagatagatgctggcaaaaccactgt
agacaaatgataatgatcaggagcatatttttgtttctggatagaacttacgttcttcag
aattcgatgcttccctccatttgggatatgggcctggagttatttagggcccatataata
agtgatcagaaagtacagaataagacaatcgacggcattctcctcctgatagaacgggaa
aggaatggtgaagccattgataggagtttacttcgaagcctcttaagcatgctttctgat
ttgcaaatttaccaagattctttcgaacaacgatttctggaagaaactaacaggctctat
gcagctgaaggccaaaaactaatgcaggaaagagaggttccggagtatcttcatcacgtt
aacaaacgtctagaagaagaagcagatagacttattacttacttagatcagaccacccag
aaatcattaatcgctactgtagaaaagcaacttcttggtgaacacttagcagcaattctt
cagaaaggtttaactaatctccttgatgaaaaccggattcaagaattatctctactttat
cagcttttcagtagagttcgaggtggagttcaggttctgttacaacaatggatcgaatac
attaaggcatttggcagcaccattgtaattaatcctgagaaagataaaaccatggttcaa
gaattgctggattttaaagataaagttgaccacataattgatatttgttttatgaagaat
gaaaaattcattaatgccatgaaagaagcatttgaaacatttattaacaaaagaccgaac
aaacctgctgaactgatagctaagcatgtagattcaaagcttcgtgctggcaacaaagaa
gccacagatgaagaacttgaaaaaatgttagataaaattatgatcatttttagatttatc
tatggtaaggatgtttttgaggccttctataagaaagatttagccaaacgcctgttagtt
gggaagagtgcatctgtagatgctgaaaaatcaatgttgtccaaacttaagcacgaatgt
ggagctgcttttactagcaaacttgaaggaatgtttaaagacatggaactctcaaaagac
atcatgattcagttcaaacaggtaagatatatgcagaatcagaatgtacctgggaatatt
gaactaactgtgaatattctgacaatgggttattggccaacttatatccctatggaagtt
catttaccaccagagatggtaaaactacaggagatttttaagacattttacctgggtaaa
catagtggccgaaaacttcagtggcagtcaacactgggccactgtgtactaaaagctgat
tttaaagaaggcaaaaaagaactccaggtctctctcttccaaactttggtgctgctaatg
tttaatgagggagaggattttagtttagaagagataaagcaggctactggaatagaggat
ggagaattacggagaacactgcagtcattggcttgtggcaaagccagagttctggcaaaa
tatcctaagggcaaagatatagaagatggagacaggtttatttgcaatgatgatttcaaa
cacaaactctttaggataaagatcaatcagatccagatgaaagaaacggttgaagagcaa
gcaagtactacagagagagtatttcaagacagacaatatcaaattgatgctgcgattgtt
cgaattatgaagatgagaaagacccttagccacaatctccttgtttcagaagtatacaat
cagttgaaatttccagtaaagcctgctgatctgaaaaagagaatagaatcattaatcgac
cgagattacatggaaagagataaggaaaatccgaaccagtacaactacatcgcataa

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