Suncus etruscus (white-toothed pygmy shrew): 125999917
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Entry
125999917 CDS
T09902
Symbol
TARS1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125999917 (TARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
setr01007
]
125999917 (TARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
125999917 (TARS1)
Enzymes [BR:
setr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
125999917 (TARS1)
Amino acid related enzymes [BR:
setr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125999917 (TARS1)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125999917 (TARS1)
Prokaryotic type
125999917 (TARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
125999917
NCBI-ProteinID:
XP_049623639
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All DBs
Position
2:complement(98196824..98583980)
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AA seq
723 aa
AA seq
DB search
MSEEPSSNLSGKMGGQEKPVDAGEEKRKEGGKKKNKEGAGDGGRAELNPWPEYINTRLEM
YNKLKEEHDSILAEKAEKYSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIA
KVNKVVWDLDRPLEEDSTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIE
SGFYYDMYLEEGCVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFKYNKFKCRIL
NEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRVYGI
SFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMDFI
RSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMF
DHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCL
DFLRTVYTVFGFSFKLNLSTRPEKFLGDIEVWNRAEKQLENSLNEFGEKWELNPGDGAFY
GPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERM
IAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAEFMVDVDLDPGCTLNK
KIRNAQLAQYNFILVVGEKEKGSGTVNIRTRDNKVHGERTISDTIERLQELKQSRNKQAE
EEF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagagccgagcagcaacctttcagggaagatgggaggccaggagaagccggta
gacgctggtgaggagaagcgaaaggaaggaggcaagaagaagaataaagaaggagctggg
gatggagggcgagcagagttgaacccctggcctgaatatattaacactcgtcttgagatg
tataataaactaaaagaagaacatgattctattctggctgaaaaagctgaaaaatacagc
aagcccattaaagtgactctcccagatgggaagcaggtggatgcagaatcctggaagaca
accccatatcaaattgcctgtggaattagtcaaggcctggctgataacaccgtaattgct
aaagtgaataaagttgtttgggacctcgaccgccctctggaggaagatagtaccttggag
cttctcaagtttgaggacgaggaagctcaagcagtatattggcactcaagtgcacacata
atgggtgaagcaatggaaagagtctatggtggatgtttgtgttatgggccaccaatcgaa
agtggattctattatgacatgtaccttgaagaagggtgcgtgtccagcaatgatttctct
tctttggagactttatgtaagaaaatcattaaagagaaacaagcttttgaaagactggaa
gtgaagaaagaaactctgttggaaatgtttaagtataacaaattcaaatgccggatattg
aatgaaaaagtgaacactccaactaccacagtctataggtgtggccctctgattgatctc
tgccgtggtccacatgtcagacacactggcaaaatcaaaactttaaaaatacacaaaaat
tcctccacatactgggaaggcaaagcagatatggagacactgcagagagtatatggcatc
tcatttccagatcctaaaatgctgaaagagtgggagaagttccaagaagaagctaaaaac
cgagatcataggaagattgggagagaccaagaattatacttctttcatgaactcagccct
gggagttgcttcttcctgcccaagggagcatatatttataatacactaatggactttatc
aggagtgaatatcggaagcgagggttccaggaagtggtcaccccaaacatctacaacagc
cggctgtggatgacatcgggccactggcagcactacagcgaaaacatgttctcctttgag
gtggagaaggagcagtttgcactgaagcccatgaactgcccaggacactgccttatgttt
gaccaccggccacggtcctggcgggaattgcctctgcggttagccgattttggagtcctt
caccgcaatgagctgtcaggtgcactcacaggtctcacccgggtgcgaaggttccagcag
gatgatgcccacatcttctgtgccatagagcagatcgaggacgagattaagggctgcttg
gattttctccgaacagtatatactgtttttggattttcttttaaactgaacctgtccacc
cgcccagaaaaattcctgggagacattgaagtctggaatcgagccgagaaacaacttgaa
aatagtctaaatgaatttggtgaaaagtgggagttaaaccctggtgatggagctttctat
ggtccaaagattgacatacaaattaaagatgcaattgggcgataccaccagtgtgcaacg
atccagttggattttcagctgcccatcagatttaatcttacttttgttagtcatgatggt
gacgataagaaaaggccagtgattgttcatagggccatcttggggtcagtggagagaatg
attgcaatcctcacggaaaactatggtggcaaatggcccttctggctgtctcctcgccag
gtcatggttgttccagtgggaccgacatgtgatgaatatgcccagaaggtccggcaagag
ttccacgatgctgaattcatggtggatgtcgatctggaccctggctgtactttaaataag
aagatccggaatgcacagttagcacagtataacttcatcctggttgttggtgaaaaggag
aaaggcagcgggacagtcaacatccgcacacgagataataaggtccatggggagcgcacc
atctccgatactattgagaggctccaggagctaaagcagtcccgcaacaagcaggcagaa
gaagaattctaa
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