Suncus etruscus (white-toothed pygmy shrew): 126000481
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Entry
126000481 CDS
T09902
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
126000481 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126000481 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126000481 (CLIP1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
126000481 (CLIP1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
126000481 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
ERM_helical
GARS_A
Motif
Other DBs
NCBI-GeneID:
126000481
NCBI-ProteinID:
XP_049623704
LinkDB
All DBs
Position
2:complement(1943434..2258698)
Genome browser
AA seq
2089 aa
AA seq
DB search
MSLLRPSGLKAPTRILKPGSSALKAPTAVAAAVEKTVASEKAPSTPPTGPQEDFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLSRSAQAEDEANGLQGTPASRAASPLTSTPGPPKTAQPTAAQPHISNLSKTASESVS
NLSEAGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAV
AGTRYFHCQPKYGLFAPDHKVTKIGFPSTTPAKAKAAAVRRVMASGQAMKRSPSASSLSS
VSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEV
AKATSHVGEMEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKV
EDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEAAELRRRLESNRPSGDVDT
SLSLLQEISSLQEQLNGARTDHQREVAQLREQLGGREDAHRQEMQALQATTDKLSRENES
LRSKLERADQENSDVITLWKSRLDTAIASHQQAMGELKASFSRGLGAAAADTAGTRLGDQ
QDPELGELQAQLRQVLQEKESGLEVARAKLDQAEEQHLVEMEDALNKLQEAEAKVKELEA
LHAPCGQQGQAVAELTAQLRAAEEKLSQFQEAQNEGKSETEVLRQQLQAAERQIQDLEEA
KRAESDKASSAASELQGKELALSHLQESLGEASRVKEALEKELQALKEKFAEASEEAGSV
QTKMQETISKLHQKEEQFTALSSELGKLQETLTGMEAKFKERDEREEQLLKAKTKLENEI
AEIMKMSGDSSSQLSRLNDELRLKERCVQELEVKLTKATENASVLQKNLGEVTVRAEQSQ
QEAARKHEDEKQELHKQLSDLEQKVESSLGQCQALQAKYEEASSESKARHEEALRVQKLL
LEAEERLRMAQAENGQLLQEMVELRKQADKAKSLTYLLTSAKKEIELMSEELRVLRSQKQ
LLEQEGAGLKVEQGSLLAKLVEVEARTSLLQEDHKNLRLAHQMLRLDQEKTLEAKLAAEK
LYRQERLGKEALAAEREKLRVEAGAMREELLRLHAENEALQEAQMGLKAQVDEAQLSESS
LMAKFQKGREDRDRLQESVQKLILENKALAQAKDEAIRELRGSYEELARAQKALMQEVEE
LTTEKKSALEKQLNLDNLCVALTLERDTLAQSHKALQLEKERAQKEQEQLQASLDAALQA
KQLLSAQAGHLRSQLDEAATTVHKTELEVLQAQAANTGLTRLLEQLQASREVSTSECLQL
LHDKETLTVAERRLAAERKELLGQNSRLAEELRRRSEEAAHVERNLQERLDLLSSEQEQA
SQKAATLRRQHEALLQEKAALERKLSDLLAQTEESAQALENVTKKHEEEAASRRLLAQEK
TQLLGELDTLKQELQELAAGKGDLALLLLEAQSARKSLEKEQAGLQQAHEALSVELQTCR
AEKNVLLRDNLNLQGQYEQLQEESRAAQQALASELDTHAAQSEASSREVGRLQGRMVQLE
QELEQLQARSQGLQADNVELTQEKSCADQKAAQMLEEKELLRAEAARLAANIDTLKSDFA
ALSQSKAELQGLHSCLTQILQDLRRQHEATAAERTQAVQESKRLLAATRELQQEKEALAQ
SYFLLQKEMSQLAATNSHVSAQLLEAQKENRVLRKDRSKLTGKLGELQALQSLTAVQTAE
DTKQIMEQMTKEKSETLASLEDSKLTNEKLQSELDTLKENNLKNVEELNKSKELLTVENQ
KMETFKKEIEALKQAAAQKAQQLSALQEENVKLTEELGRSRDQVTSQQKLEEERSVLNNQ
LLEMKKRESELIKDSEEEKASLQKSISITSALLTEKDAELEKLRNEVSVLRGETASAKSL
HLVVQSLESDKVKLELKVKSLELQLKENKRQLQSSTGNTDTKAEEDERAQENQIDFLNSV
IVDLQRKNQDLKMKVEMMSEAALNGAGDDLNNYDSDDQEKLSKKKPRLFCDICDCFDLHD
TEDCPTQAQVAEDPPHSTHRGSRSEERPYCDICEMFGHWPSNCNDDETF
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgagtctactcaggcctagtgggctcaaggcccccaccaggatcctcaagcctgggagc
tcggccctgaaggcacccacagcagtcgctgctgctgtggagaaaactgtggctagtgag
aaggcccccagcacgccacccacggggccacaagaggacttcgtggatgacttccgtgtc
ggggagcgggtctgggttaatgggaacaagccaggcttcatccagttcctcggagagacc
cagttcgcccctggccagtgggccgggatcgtcctggacgagcccatcggcaagaacgat
ggctcggtggcgggggtgcgctacttccagtgtgagcccctgaagggcatcttcacccgc
ccgtccaagctcagccgctcggcgcaggccgaggacgaggccaatggcttgcagggaaca
cctgcctccagggccgcttcgccgctcacctccacccccggccccccgaagacggcccag
cccaccgctgcacagcctcacattagcaacctcagcaaaacagccagtgagtccgtctcc
aacctctctgaggccggctcggtcaagaaaggggagcgagagctcaaaatcggggaccga
gtgctggttggcggcacgaaggctggtgtggtgcgcttcctcggggagacggactttgcc
aagggcgaatggtgtggcgtggagctggacgagcctctgggcaagaacgatggtgctgtg
gccggaacaaggtatttccactgtcagcccaagtacggcctgttcgctccggaccacaaa
gtcaccaagatcggcttcccctccaccacgccggccaaggccaaggccgcagctgtgcga
cgcgtgatggcttcaggccaggccatgaagcgcagcccgtccgcctcctccctcagctcc
gtgagctccgtggcctcatccgtgagcagcaaacccagccggaccggactcttgacagaa
acctcctctcgctacgcccgcaagatttcgggcaccacggcgctccaggaggcgctgaag
gagaagcagcagcacatcgagcagctgctggctgagcgggacctggagcgggcggaggtg
gccaaggccactagccacgtgggggagatggagcaggagctcgccctggcccgggatggg
cacgaccagcatgtcctggagctggaggcgaaaatggaccagctgcggacaatggtggag
gcggcagacagggagaaagtggagctgcttaaccagctggaggaggagaaaaggaaggtg
gaggaccttcagtttcgagtggaggaggagtcgatcaccaaaggtgacctggaggtggcc
accgtctctgaaaagtcccgaatcatggagctggagaaagacctggcattgcgggcgcag
gaagccgccgagctccggagacggctggagtccaacaggccatcgggagacgtggacacg
tcgctctccctgctgcaggagatcagctccctgcaggagcagctgaacggagcccgcacc
gaccaccagcgggaggtggcccaactcagggagcagctggggggccgtgaggatgcccac
cggcaggagatgcaggccctgcaggccaccaccgacaagctgtccagggagaatgagtcc
ctgaggagcaagctggagcgggccgaccaggagaactcggacgtgatcacgctgtggaag
tccaggctggacacggccattgcgtcccaccagcaggccatgggcgagctcaaggcctcc
ttcagccggggcctgggcgccgctgccgctgacacagccgggacgaggctgggggaccag
caggaccccgagctgggagaactccaggcccagctgcgccaggtcctccaggagaaggag
agtggcctggaggtcgcccgggcgaagctggaccaggcagaggagcagcacctggtggag
atggaggacgccttgaacaagctgcaggaggctgaggcgaaggtaaaggaactggaggcg
ctgcacgccccatgtggccagcaaggccaggccgtggctgagctcacggcgcagctccgg
gccgcagaagagaagctctcacagttccaggaggcccaaaacgaaggtaaatcagaaaca
gaggtgctgaggcagcagttgcaggcagccgagcgacagattcaggacttagaggaggcc
aagcgggctgagagtgacaaggccagtagtgctgccagcgagctgcaggggaaggagtta
gcccttagtcacctgcaggagagcctgggggaagcaagtcgagtcaaagaggccctggag
aaagagcttcaggctctgaaagagaagtttgccgaggcttccgaagaggcgggctctgtt
cagacaaagatgcaagagaccatcagcaagttacaccaaaaagaggagcagttcaccgca
ctgtcttcggagctggggaagttgcaggagacgttgacaggtatggaggccaaattcaaa
gagagagatgagcgagaagagcagctgctaaaggcgaagaccaagttggagaacgagatt
gcagagatcatgaaaatgtcgggggacagttcctctcagctgtcaaggttgaatgacgag
ctacgcctgaaagaaaggtgtgtgcaagagttagaagtcaagctgacgaaggccaccgaa
aatgcaagtgtcttgcaaaagaatctgggggaggtgaccgtccgagctgagcagagccag
caggaagcagctcggaagcacgaggacgagaagcaagagctacacaagcaactgtccgat
ctggagcagaaggtggaaagcagccttggccagtgccaggctctgcaggccaagtacgag
gaggccagttctgagagcaaggcccggcatgaggaggccctgcgggtgcagaagctgctg
ctggaggccgaggaaaggctgcggatggcgcaggcggagaacggccagttgctgcaggag
atggtggagctccgaaaacaggccgacaaagccaaatcgctaacatacttattaacatct
gccaaaaaagaaattgagcttatgtcggaggagctgagggttctgaggtcccagaagcag
ctgctagagcaggagggagccggtctcaaggtggagcaaggctcgctcttggccaagctg
gtggaggtggaggccaggacctctctgctccaggaagaccacaagaatcttcggcttgca
caccagatgctccgcctggaccaggagaaaaccctggaggccaagctggctgccgagaaa
ctctaccggcaggagcggcttgggaaggaagcgctggcagcggagagggagaagctgcgg
gttgaggccggagccatgcgggaggagttgctgaggctccatgcagagaacgaggcactg
caggaggcccagatggggctgaaggcacaggtggacgaggcccagctcagcgagagcagt
ttgatggctaaatttcagaagggccgcgaggaccgggaccgcctgcaggaatcagtccag
aagttgattctggagaacaaggccctggcccaagccaaggacgaagccatccgggagctg
cggggctcctacgaggagcttgcccgcgcccagaaggccctcatgcaggaggtggaagag
ctgacgactgagaaaaaatcggccctggagaagcagctgaacctcgacaacctctgcgtg
gccctgacgctggagcgtgacactctggcccagagccacaaggccctgcagttggagaag
gagcgggcgcagaaggagcaggagcagctgcaggccagcctggatgcagccttgcaggcc
aagcagctgctgagcgcccaggccggccaccttcgctcacagttggatgaggcggccacc
accgtgcataagaccgagctggaggtgctccaggcacaggcggccaacaccggcctcaca
cggctgctggagcagctccaggccagccgggaggtctcgacctccgagtgcctccagctc
ctgcatgacaaggagacgctgacggtggcggagaggaggctggcagccgagaggaaagag
ctgctgggccagaacagccgcctggccgaggaactgcgccggcgctcggaagaggcggcc
catgtggagcggaacctgcaggagaggctcgacttgctcagctccgagcaggagcaggcg
agccagaaggcggcaacgttgcgccggcagcatgaggccctcctgcaggagaaggcggcc
ctggaaaggaagctcagcgacttgctggcccaaacggaggagtcggcccaggccctggag
aatgtcacgaagaaacacgaggaggaggcggccagccggaggctcctggcccaggagaag
acgcagctgctgggggagctggacaccctcaaacaagagctccaggagctggcggctggc
aagggcgacctggcgctgctgctgttggaggcgcagagcgcccggaagagcttggagaag
gagcaggcaggcctgcagcaggctcatgaggccctcagtgttgagttgcagacttgccgc
gccgagaagaatgtgctgctacgggacaacctgaacctccagggccagtacgagcagctc
caggaggagagccgtgccgcccagcaggccctagcatcggagctggacactcacgccgcc
cagagcgaagcctcatctcgcgaggtgggccggctgcagggcagaatggtgcagctggag
caggagctggagcagctgcaggcccggtcccaggggctgcaggcggacaacgtggagctc
acccaggagaaatcctgcgccgatcagaaggcggcccagatgctggaggagaaggagctc
ctgagagccgaggccgcccgcctggcagccaacatcgacaccctgaaaagcgatttcgca
gctctgtctcagtccaaggcagagctgcagggcctgcacagctgcctcacccagatcctg
caggacctgaggcggcagcatgaggccacagcggccgagcgcacccaggccgtgcaggag
agcaagaggctgctggctgcgacgcgggagctgcagcaggagaaggaggcgctggcccag
agctactttctcctgcagaaggagatgagccagctggccgccaccaacagccacgtgtcg
gcccagctcctggaggcccagaaggagaaccgtgtcctgcggaaggaccggagtaaactc
acggggaaacttggggagctccaggcgctgcagtcgctcacggctgtgcagacggcggaa
gacaccaagcagatcatggagcagatgactaaggagaagtcagagacattggcctctttg
gaggacagcaaactcacaaacgagaaactccagagcgaattggacactctcaaagaaaac
aacttgaagaacgtggaagagttgaacaaatcgaaagagcttctgactgtagagaatcaa
aaaatggagacattcaagaaagaaatagaggccctgaagcaggcggctgcccagaaggct
cagcagctctccgcgctgcaggaagaaaatgtgaaacttactgaggaattggggcgtagc
cgagaccaagtcacgagtcagcaaaagctggaagaagagagatccgtgctcaacaaccaa
ctgctagaaatgaaaaagagagaatccgagttaataaaagactccgaggaagagaaagct
tccctgcagaaatccatcagtattaccagtgctttgctcacggagaaagacgcggagttg
gagaaactgaggaatgaggtgtcagtgctcaggggagagacggcttctgccaagtccttg
catctcgtggtccagtctctcgagtcggataaggtgaagctcgagctcaaggtcaaaagc
ctggagcttcaactcaaagagaacaagaggcagcttcagagctcgacaggtaataccgat
acgaaggcagaagaggatgaaagagcccaggaaaatcagattgatttcctgaattccgtt
atcgtggacctccaaagaaagaatcaggacctaaagatgaaagtggagatgatgtccgaa
gcggccctcaatggagcaggggacgacctcaacaattacgacagtgatgaccaggaaaaa
ctgtccaaaaagaaaccacgtctcttctgtgacatctgcgattgcttcgatctgcacgac
acggaggactgccccacgcaggcacaggtggccgaggaccccccacattccacacaccgg
ggcagccgcagcgaggagcggccctactgcgacatctgcgaaatgtttgggcactggccc
agcaactgcaacgacgacgagaccttttga
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