Suncus etruscus (white-toothed pygmy shrew): 126000606
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Entry
126000606 CDS
T09902
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126000606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126000606
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126000606
U7-dependent histone pre-mRNA processing factors
126000606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
Motif
Other DBs
NCBI-GeneID:
126000606
NCBI-ProteinID:
XP_049623775
LinkDB
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Position
X:4063..6458
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AA seq
717 aa
AA seq
DB search
MSRPEQYLDYARFSQISRDRFSAIPAVKPAPPSLLRTNPHLPFPGGLEFAEYKPKFSRSA
EKPEPFRHSTGTHVSHPNGEHHFRRRPEAEGGREDAARGGKMSSLAVRDPAMERSLLSEV
GSVVSFRLVSDRETGKPKGYGFCEYQDQETALSAMRKLNGREFRGRALRVDNAASEKNKE
ELKSLGPAAPVLDSPYGDPIDPEDAPESITRAVASLPPEHMFELMKQMKLCVQNSHQEAR
NMLLQNPQLAYALLQAQVVMRIVDPEIALKILLRKVHVTPLIPGKNQPVSGPGPGPGPGH
GPGPGPGPSLGLCQAPGVLLSQPNPSAPQPQHLARRPVKDILPLMQTPIQGGIPAPGPMP
AAVPGPGPGPGPGALTPGRAMQPQVGMPGVVGPVPLEHGQVQVQVQMADPRAPMPRGPMA
AGGLPPRGLLGDAPNDPRGGTLLSVTEEEPRVYLGPPHQGPPMRHASGHDGPSVHEMRGG
PMADPRLLIGEPRGPMLHQRGLPMDGTGGRDTRGLEVPALETEVLESRVMEGRGMETCAL
ENRAMEARAMEARAMEGRGMEIRGPVPTSRDPMTGGIQGPGPISMGAGRPQGPRQVPNIA
AVGNPAAAMQGAVLQGPGMQGASIQGAGMQGAGLQGVGMQGGGMQGAGMQGAGKQGGGQP
SSFSPGQSQVTPQNQEKAALIMQILQLTADQIAILPPEQRQSILILKEQIQKSTGAS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcctgaacagtacttagactatgcacgcttcagccagatctcgcgagaccgc
ttctccgcgattcccgcggtaaagccggcgccgccatctttactgaggacaaacccccac
ctacccttcccgggcggtcttgagttcgctgaatacaaaccaaagttctcgcggtccgcg
gagaagccggaaccatttcggcacagcaccggaacgcacgtttcccacccgaacggggag
caccacttccgccgcagaccggaagcggagggcgggcgagaggacgccgctcgcggaggc
aagatgtcgagcctggcggtgcgagaccccgccatggagcgctccctgctctcggaggtg
ggctcggtggtgagcttccgcctggtgtccgaccgcgagacgggcaagcccaagggctac
ggcttctgcgagtaccaggaccaggagacggcgctgagcgccatgcgcaagctcaacggc
cgcgagttcagggggcgcgccctgcgcgtggacaacgcggccagcgagaagaacaaggag
gagctcaagagcctgggccccgccgcgcccgtcctcgactcgccctacggggaccccatc
gaccccgaggacgcccccgagtccatcacgcgcgccgtggccagcctcccgcccgagcat
atgttcgagctcatgaagcagatgaagctctgcgtgcagaacagccaccaggaggcccgc
aacatgctgctgcagaacccgcagctggcctacgccctgctccaggcccaggtggtgatg
cgcatcgtggaccccgagatcgccctcaagatcctgctccgcaaggtccacgtcacgcct
ctcatcccaggcaaaaaccagcccgtctccgggcccggacccggccctggacccggacac
ggccctggccctggccctgggcccagtcttgggctctgtcaggctcctggggtgctgctc
agtcaaccgaatccgtctgcgcctcagccccaacatctggctcgaaggcctgtgaaggat
attctgcctctcatgcagacccccattcaaggaggcatccccgctcccgggcccatgcca
gctgccgtccccggacccgggcctggacctggtcccggcgctctcactcctggcagggcg
atgcaaccccaagttggaatgccaggggtggtggggccggtgcccctggagcatgggcaa
gtgcaagtgcaggtgcagatggcggatccccgagcccccatgccccgtggacccatggct
gccggcggcctcccacctcgaggactgttgggagatgcgcccaatgacccacgtggaggg
actttgctttccgtcaccgaagaggagccccgagtctacttgggccccccacatcagggg
ccccccatgcgccatgcctctgggcatgacggcccctcggtgcatgagatgagaggaggc
ccgatggcagatcccaggctgctcattggggagccccgtgggcccatgctccatcagaga
ggtctaccaatggatggcacaggtggcagagataccagaggtctggaggtgcctgctctg
gagactgaggtgttggagagccgcgtgatggaagggagaggaatggagacctgcgccctg
gagaacagagccatggaagccagagcgatggaagcacgagcgatggaaggcagaggaatg
gagatcaggggccctgttcccacttcaagagaccccatgactggtggaattcagggtcct
ggacccattagtatgggggcaggtcgtcctcaggggcccagacaggtccccaatattgct
gcggtgggcaatcctgcagctgccatgcaaggagctgtcctgcagggccctggcatgcag
ggggcaagcatccagggagctggtatgcagggagcaggcttacagggagttggcatgcaa
ggaggaggcatgcagggggctggtatgcagggagctggtaagcaaggtggaggccagccc
agcagttttagccccgggcagagccaggtaactccacagaatcaagaaaaggcagctttg
atcatgcagattctacaacttaccgctgatcagattgccatactgcctccagaacaaagg
cagagtatcctgatcttaaaggagcagatccagaagtccactggggcttcttga
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