Suncus etruscus (white-toothed pygmy shrew): 126000792
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Entry
126000792 CDS
T09902
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
126000792 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126000792 (TRIP13)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
126000792 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_14
AAA_25
Viral_helicase1
KAP_NTPase
AAA_24
AAA_28
NPHP3_N
AAA_5
RNA_helicase
DUF815
RuvB_N
AAA_33
IstB_IS21
TsaE
Cytidylate_kin
NACHT
AAA_17
AAA_11
ATPase_2
AAA_30
ABC_tran
bpMoxR
AAA_7
TIP49
Zot
Rad17
Mg_chelatase
AAA_19
NRBF2
nSTAND1
Sigma54_activat
PhoH
PduV-EutP
AAA_3
SLFN-g3_helicase
Zeta_toxin
SMC_N
Motif
Other DBs
NCBI-GeneID:
126000792
NCBI-ProteinID:
XP_049623895
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All DBs
Position
2:complement(94848702..94854775)
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AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVAETPAVHVEVHQRAGSTARKDDIRQSVKKLLNRHNIAFGDYTWTE
FDDPFLTRNVQSVAIVDTELKAKDPQPIDLRACTVALHIFQLNEDSPTCENLEEETESIV
AANHWVLPAAEFHGLWDSLVYDAEVKSNLLDYMLTTLLFSDKKVDSNLVAWNRVVLLHGP
PGTGKTSLCKALAQKLSIRLSNRFRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDII
DDKDGLVFVLIDEVESLTAARSASRASAEPSDAIRVVNAVLTQIDQIKRHSNVIILTTSN
ITEKIDVAFVDRADIRQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSRLSLLLSDISRKSEGLSGRVLRKLPFLAHALYIQAPTVTIEGFLQALSLAVDK
QFEEKRQLSSCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgtgggcgacctgaagcaggcgctgccctgcgtggccgagacgcccgcc
gtgcacgtggaggtccaccagcgcgcgggcagcaccgccaggaaagacgacatccgacag
agtgtcaagaagctgctcaaccgtcacaacattgcgttcggggactatacctggactgag
ttcgacgaccctttcctgactaggaacgtgcagtctgtggccatcgtggacacggagctg
aaagcaaaagacccacagcccattgacctgagagcctgcactgtggcactgcacatcttc
cagttgaacgaggacagcccaacctgtgagaacctggaggaggagaccgagagcatcgtg
gccgccaaccactgggtcctgccagcagctgagttccatgggctctgggacagccttgtg
tatgacgcagaggtcaagtcaaatctcctggactatatgctgaccacactgctgttctca
gacaagaaggtggacagcaacctcgtggcctggaaccgggtggtgctgttgcatgggcca
ccagggaccggaaagacctcactatgcaaagctctggcccagaagctgagcattcggctg
tccaacaggttccgttatgggcagctgatcgagatcaacagccacagcctcttctccaag
tggttctcagagagcggcaagctggtgaccaagatgttccagaagattcaggacataatc
gacgataaggatgggctggtgtttgtgctcatcgatgaggtggagagcctcacagctgcc
cgcagtgccagcagggcaagcgcagagccctccgatgccatccgagtggttaatgccgtc
ctgacccagattgaccagatcaagcgacactccaacgtgatcatcctgaccacgtccaac
atcactgagaaaatcgacgtggccttcgtggatcgcgcggacatcagacagtacattggg
ccgccctcggccgctgccatcttcaagatctacctgtcatgtttggaggagctgatgaag
tgccagatcatctacccacggcagcagctgctgacacttcgtgagctggagatgattggc
tttatcgagaacaatgtgtcgcgcctcagcctgctgctcagtgacatctccaggaagagc
gagggcctcagtggccgtgtcctgcgcaagctgcctttcctggcccatgccttgtacatc
caggcacccacagtcaccatcgagggcttcctccaggccctctcgctggccgtggacaag
cagtttgaggagaagcggcagctgtcatcctgtgtgtga
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