Suncus etruscus (white-toothed pygmy shrew): 126000927
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Entry
126000927 CDS
T09902
Symbol
DHX29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
setr03012
]
126000927 (DHX29)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126000927 (DHX29)
Translation factors [BR:
setr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126000927 (DHX29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
DSRM_DHX29
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_16
ATPase
AAA_19
Cytochrom_D1
SF3A3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
126000927
NCBI-ProteinID:
XP_049624065
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All DBs
Position
2:complement(113818003..113876431)
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AA seq
1367 aa
AA seq
DB search
MGGKNKKHKAPGAAAVRAAVSAARAKSAEAAAAGEAPSKKPAARPPPATAAGAKEPRAKQ
GPKIYSFNSTNDSGGPANLDKSILKVVINNKLEQRIIGVINEHKKQNNDKGIISGRLTAK
KLQDLYMALQAFSFKTKDIEDAMTNTLLHGGDLHSALDWLCLNLSDDALPEGFSQEFEEQ
QPKSRPKFQSPQIQATISPPLQPKTKKQEEEAKIKTKKEEKHTEVNMKEWILRYAEQQNE
EEKSENSKSLEEEEKFDPNERYLQLAAKLLDAKEQAASFKLEKNKQGQKEAQEKIRKLQR
EMETLEDHPVFNPAIKISHQQNEKKKPPITTEGESALNFNLFEKPTATEGEKEKKKEPHD
VRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPNPSFEKVAVGRYWKCRVKVIKSDDDVLV
VCPTILTEDGMQAQHLGATLALYHLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKME
TNKPRDLFIAKLLNKLKQQQQQQQKHSESKKENSEDPEESWENLVSDEDFSALSLESEKA
EDLEPVRNLFRKLQSTPKYQRLLKERQELPVFKHRNSIVETLKRHRVVVVAGETGSGKST
QVPHFLLEDLLLNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQI
RMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQ
KRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEY
CQKFLEEEEEITINVTSKAGGIKKYHDYIPVQTGTNVVDLNPFYHKYSNRTQHAILYMNP
HKINLDLILELLTYLDQSPQFRNIEGAVLIFLPGLAHIQQLYDLLSADRRFSSERYKVIA
LHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQM
SSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHI
MKCSLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKI
GKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAY
IGWKKARQEGGYRSEMTYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSNSWEGN
RTSQTLSFQEIALLKAVLAAGLYDNLGKIMYTKSVDITEKLACIVETAQGKAQVHPSSVN
RDLQTYGWLLYQEKIRYSRVYLRETTLITPFPVLLFGGDIEVQHREHLLSVDGWIYFQAP
VKIAVIFKQLRVLIDSVLRKKLENPKMSLENDKILQIITELIKTENN
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagaacaagaagcacaaggcgccgggagccgcggcggtccgggccgccgtg
tcggccgccagagccaaatccgctgaagccgcagctgccggggaagctccgagcaagaag
cccgcggcccggccgccccccgccacggccgccggcgccaaggagccccgcgccaagcaa
ggccccaaaatttatagttttaactctacaaatgattctggaggtcctgcaaatctggat
aaatccattttgaaagtggttatcaataataaacttgagcaaagaattattggagtgatc
aatgaacataaaaaacaaaataatgacaaagggataatttctggaagacttactgcaaaa
aaattacaggatttgtatatggctttacaagcattttcatttaagacgaaagacattgaa
gatgccatgactaacactctcttacatggaggtgatctccattcagccttggattggctt
tgtttaaatctttcagatgatgcacttcctgaaggattcagtcaagaatttgaagaacaa
caacctaaaagtagaccaaaattccagtctcctcaaatacaagccactatttcacctcca
ttgcaacctaaaaccaaaaagcaagaggaagaagctaagattaagacaaaaaaagaagaa
aagcatacagaagtaaatatgaaagaatggattttgcggtatgctgagcagcaaaatgaa
gaagaaaagagtgagaattctaaaagtttagaagaagaggaaaaatttgacccaaatgaa
aggtacttgcagcttgcagcaaaacttcttgatgcaaaggaacaagcagcttcctttaaa
ctagaaaaaaacaagcaaggccaaaaggaagcacaagaaaaaatcagaaaacttcaaaga
gaaatggaaactttggaagaccatccagtatttaatccagctataaagatttcacatcaa
cagaatgaaaagaagaaacctcccataaccacagaaggggaaagtgctttgaactttaat
ttatttgaaaagcctacagctactgaaggagagaaagagaaaaaaaaagaacctcacgat
gtaagaaattttgactatactgctcgaagctggactggaaaatctcccaaacaatttctg
attgattgggtcaggaagaatcttcccaagagtccaaatccttcctttgaaaaagttgca
gtaggtcgatactggaaatgtagggtgaaggtaataaagtctgatgatgatgtactggtt
gtatgccctacaatcttaacagaggatggcatgcaagcccagcatctgggagcaacttta
gctctgtatcatctagtcaaagggcagtcagttcatcagttacttcctcccacttaccga
gatgtttggctggaatggagtgatgcagaaaagaaaaaggaagaattaaataaaatggaa
accaataaaccacgagatctttttattgctaagcttctgaataaactgaaacaacagcag
caacagcaacagaagcactctgaaagtaagaaagaaaattctgaagatcctgaggaatct
tgggaaaacttagtatctgatgaggatttttctgccctgtccttggaatcagaaaaagca
gaagatttggaacccgttagaaacctctttagaaagttgcagagcacacctaaataccag
agacttctcaaagagaggcaagagttgcctgtgttcaaacaccggaattccattgtggaa
actcttaaaaggcaccgggtagtggtggtagcaggtgaaacgggaagtggtaaaagtact
caagtaccacactttctcttggaagacttgcttctaaatgagtggggaacaagtaaatgt
aacattgtctgtacccagcccagaagaatctcagctgtgagcttggctacaagagtttgt
gatgaattgggctgtgaaaatgggcctggaggaaggaattctttgtgtggctatcaaatt
cggatggaatctcgagctagtgaatctactcgtttactgtattgtacaacaggagttttg
cttaggaaacttcaagaagatggcctcttaactaatgtgtctcatgttattgtagatgag
gttcatgaaagaagtgtccagtcagactttctactaattatcttgaaggaaattttacag
aaacgctccgatctacacttgattctgatgagtgcaactgtagacagtgaaaagttttct
acatatttcacacactgtcctattcttagaatttctggaagaagttatcctgttgaggtt
tttcatcttgaagacataatagaagaaacaggctttgtcctggagaaagactcggaatat
tgtcaaaaatttctggaggaggaagaagaaataaccattaatgttacaagcaaagcaggg
ggaattaaaaaatatcatgactacatcccagttcaaactggaacgaatgttgttgattta
aatcctttttaccacaagtacagcaaccgcactcagcatgccattctctacatgaatcct
cataaaatcaacctagatctgattttggaacttcttacatatttagaccaaagtccgcag
ttcagaaatatcgaaggagcagtattgatctttttaccaggccttgctcatattcaacaa
ttgtatgatctcctatcagctgacagaagattttcttctgaacgatataaagtgatagct
ctgcattctattctttcaactcaagatcaagctgcagcattcacacttcctcctcccgga
gtcaggaagattgtcttagcaacaaatattgcagagacaggaatcactattccagatgtt
gtatttgtaattgatactggacggacaaaagaaaataagtaccatgaaagcagtcagatg
agttctttggttgagacatttgtcagtaaagcaagtgctctgcaacgccaggggagagct
gggcgggtcagagatggcttctgcttccgcatgtacacccgagagagatttgaaggcttt
atggattattctgtccctgaaatcttgcgtgtgcctttggaggaactatgtcttcatatc
atgaaatgcagtcttggttctccagaagatttcctctccaaagccttagatcctcctcag
cttcaagtaatcagcaatgcaatgaatttacttcgaaaaattggagcttgtgaattaaat
gaacctaaactgactccactgggccaacacctggcggctttgcctgtgaatgtgaagatt
ggcaagatgcttatttttggtgccatatttggctgccttgatccagtggcaacactagct
gcagttatgacagagaagtctccttttaccacaccaattggtcgaaaagatgaagcagat
cttgcaaaatcagctttggctatggcagattcagatcacctgacgatctacaatgcatac
ataggatggaagaaagcaaggcaggaaggaggctatcgttctgaaatgacatactgccgg
aggaattttcttaacagaacatcacttttaacccttgaggatgtcaaacaggagctaata
aagttggttaaggcagcaggattttcatcatctacaacttctaacagctgggaaggaaac
agaacctcacagacactttccttccaagaaattgcccttcttaaagccgtactggccgct
ggactatatgacaatctggggaaaataatgtatacaaaatcagttgatattacggaaaaa
ctggcttgcattgtggagacagcccaaggcaaagcacaagtacatccatcctcagtaaat
cgagacttacagacttatggctggctcttataccaggagaagatcagatactcccgggtg
tatttgagagagacaacactaataactccatttccagttttactttttggtggtgatata
gaagttcaacacagggaacatcttctttctgttgatggctggatctattttcaggcccct
gtaaagattgctgtcattttcaagcagctaagagttctcattgattctgttttaagaaaa
aaacttgaaaatcccaagatgtcccttgaaaatgacaaaattctacagatcattacagaa
ttgataaaaacagagaataattga
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