Suncus etruscus (white-toothed pygmy shrew): 126001086
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Entry
126001086 CDS
T09902
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
126001086 (PUS1)
Enzymes [BR:
setr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
126001086 (PUS1)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
126001086 (PUS1)
Prokaryotic type
126001086 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
126001086
NCBI-ProteinID:
XP_049624215
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All DBs
Position
2:4640227..4644496
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AA seq
388 aa
AA seq
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MASASPQPEPEPGRKARGRQGGARVWEEPQPQAKKLKSGAAEQPPPKLPKRKIVLLMAYS
GKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGQDMRKMSFQRCARTDKGVSAAG
QVVSLKVWLIDDILEKINKHLPAHIRILGLKRVTGGFNSKNRCDARTYLYMLPTFAFAHK
DRDVQDETYRLSAETLQHVNRLLAVYKGTHSFHNFTSQKGPREPSARRYILDMFCEEPFV
HEGMEFAVIRVKGQSFMTHQIRKMVGLVVAIVKGYAPESLLERSWGEARVDVPKAPGLGL
VLERVHFEKYNERFGHDGLHEPLDWAHEEAGATAFKEQHIYPTIIGTERCERSMAQWLAT
LPAHDFSASASAKDPSPLAGSEGDEDSG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcgtccccgcagccggagcccgagccgggccgcaaagcccgcggccggcag
ggcggagcccgggtctgggaagagccgcagccgcaggccaagaagctcaagagcggcgcc
gccgagcagccgcccccgaagctgcccaagcgcaagatcgtgctgctcatggcctactcg
ggcaagggctaccatggcatgcagaggaacgtggggtcgtcccagttcaagaccattgaa
gatgacctggtgtcggcccttgtgcagtctggctgcatcccggagaaccacggccaagac
atgagaaagatgtccttccagcgctgtgcacgcacagataagggggtgtctgcagctggc
caggtggtatccctgaaggtgtggctgatcgatgacatcctggagaagatcaacaagcat
ctcccggctcacatccggatcttgggactgaagcgggtcactggtggcttcaattccaag
aacagatgtgacgccaggacctacctgtacatgctgcccacattcgccttcgcccacaag
gaccgtgacgtgcaggacgagacataccgcctgagcgccgagacgctgcagcatgtgaac
cggctgctggccgtctacaagggcacccacagcttccacaacttcacctcgcagaagggg
ccccgcgagcccagcgctcggcgatacatcctggacatgttctgcgaggagcccttcgtg
cacgagggcatggagttcgctgtgatcagggtcaagggacagagcttcatgacacaccag
atccggaagatggtggggttagtggtagccatcgtcaagggctacgcacctgagagcctg
ctggagcgcagctggggcgaggccagggtggacgtgcccaaggcacccgggctgggcctg
gtgctggaacgggtgcactttgagaagtacaacgagcgctttggccacgacgggctgcac
gagccactcgactgggcacatgaggaggcgggcgcaactgccttcaaggagcagcacatc
taccctaccatcattggcacagagcggtgcgagcgctccatggcccagtggctcgctaca
ctgcctgctcatgacttcagtgcctcggcctctgccaaggaccccagccccctggcaggc
agcgagggggacgaagacagcggctga
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