Suncus etruscus (white-toothed pygmy shrew): 126001153
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Entry
126001153 CDS
T09902
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
126001153 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126001153 (NIPBL)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
126001153 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
126001153
NCBI-ProteinID:
XP_049624316
LinkDB
All DBs
Position
2:complement(95407330..95615250)
Genome browser
AA seq
2799 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLPGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFSLRSPQPVCSPAGSDGTPKGSRPTLILPSQ
PLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDINRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSIATKQPQTSVVQNQQQISQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASVTQDSDSIKKPEEIKQCNDLPISVLQEDIVGNLKPTPENHPETP
KKKSDSELSKNEMKQNESRLADSKPNENRSVETKSSENTLEAKNEAQTEEPKQNENKITE
SKQNENTTAESKQNENKLSDTKPNDKQNNGKSETVKSRPETPKQKSESRPETPKQKSDGH
PETPKQKGDGRPDTPKQKGEGRPETPKQKNDGRPETPKHRHENRRDSAKPSTEKKSDVSK
HKQDIKSDPPRLKSERAEALKQRPDGRSISESLRRDHDKQKSDDKNESERHRGDQPRVRR
PETLRSSSRNDHGMKSDGSKSEKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDSNK
SRSGFKSPNSKDDKRTESNKSKVDSNKAHPDNKAEFPSYLLGGRSGALKNFVIPKIKRDK
DGSITQETKKMEMKGEHKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREDKSR
SSLKSIRNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKY
AEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSGGGR
YRNRSPSDSDMEDYSPPPSLTEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTAS
IENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKV
LNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPK
AVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVIVM
LYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRY
EKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVVHLP
SSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENF
VQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAV
TSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTT
LETEKAMKSQKDEESSEGAHHAKEVETTGQIMHRAENRKKFLRSIIKTTPSQFSTLKMNS
DTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPS
ILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVR
KRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEA
MTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKY
EESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVIC
NVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKF
VWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNS
KVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNILSDKNS
SVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQ
VLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEI
DKKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQH
RRAFLISLLNLFDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLL
QSFKESMVKDKRKERKSSPNKENVSSESEEEVARPRKSRKRVDSDSDSDSEDDINSVMRC
LPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTG
VHFHPKQTLDFLRSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSASTNA
RNKAITSLLGGGSPKNNAAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESV
DVMDVIAICCPKYKDRPQIARVVQKTSSGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDT
IKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8400 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccattactactcttgcggggattgctagtcttaca
gacctcctgaaccagctgcctcttccatcccctttacctgctacaactacaaagagcctt
ctctttaatgcacgaatagcagaagaagtaaactgccttttggcctgtagggatgataat
ttggtttcacagcttgtccatagcctcaaccaggtatcaacagatcacatagaattgaaa
gataaccttggcagtgatgatccagaaggcgacataccagtcttgttgcaggccatcctg
gcaaggagtcctaacgttttcagggagaaaagtatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatacgcccca
caaagccctgcaggatacatgccatattcccatccttcaagttatacaacacatccacag
atgcagcaagcctcagtatcaagtcccattgttgcaggtggtttgagaaacatccatgat
aataaagtttctggtccgttgcctggcaattcagctaatcatcatgctgataatcctaga
catggctcaagtgatgactacctacacatggtgcacaggctaagtagtgacgatggagat
tcttcaacaatgaggaatgctgcatctttttccttgagatctccacaaccggtatgctcc
ccggctggaagtgatggaacacctaaaggatcaagaccaactttaatcctaccatctcaa
cctctaccttgttcatcacctcgagatgttccaccagacatcttgctagattctccagaa
agaaaacaaaagaaacaaaagaaaatgaaattaggcaaggatgaaaaagaccagagtgag
aaagctgcaatgtatgatatcattagttctccatccaaggactcaactaaacttacatta
agactttctcgtgtaaggtcttcagacatggaccagcaagaggacatgctttctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtacccaggacagact
tcaaaaacacccattactccacaggatataaatcgcccactaaatgctgcccagtgtttg
tcgcagcaagaacaaacagcattccttccagcaaaccaagtgcctgttttacaacagaac
acttcaattgctacaaaacagccccagacttctgtggtacagaatcagcaacagatatca
caacagggacctatatacgatgaagtggaattggatgcgttggctgaaattgaacgaata
gagagagaatcagctattgaaagggaacgcttttcaaaagaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttcaacgggaaatgggtcaaggccagcattaatg
gttagtattgatcttcatcaggcaggaagagtggactctcaggcttctgtaactcaggat
tcagactccataaaaaagcctgaagaaatcaaacaatgtaatgatttacctatatctgtt
cttcaggaagatattgttggaaatcttaaacccacaccagaaaaccatcctgagactcct
aaaaaaaagtctgattctgagctttcaaagaatgaaatgaaacaaaatgaaagtagattg
gcagattctaaaccaaatgaaaatagatcggtggagacaaaatcaagtgaaaatacacta
gaagctaaaaatgaggcacaaacagaagaacctaaacagaatgagaacaaaataactgag
tccaaacaaaatgagaacaccactgctgagtctaaacaaaatgaaaacaaactctctgat
acaaagccaaatgacaaacaaaataatggcaaatcagaaacagtaaaatcaagacctgaa
accccaaagcaaaagagtgaaagcagacctgaaactccaaagcaaaagagtgatggacat
cctgaaacccccaaacaaaagggtgatgggcgacctgatactccaaagcagaaaggtgag
ggtcgacctgaaactccaaagcaaaaaaatgatgggcggcctgaaacaccaaaacatagg
catgaaaataggagagattctgcaaagccatcaacagaaaagaaatctgacgtgtctaag
cataaacaggatattaaatctgatccacctcggttaaaatccgaacgggctgaagcccta
aagcagagacctgatgggcgatctatttctgagtcattaagacgtgaccatgataaacaa
aaatcagatgacaaaaatgaatcagaacgacatcgaggggatcaacctagggttcgaaga
ccagaaacattgagatcttctagtagaaatgatcatggcatgaaatctgatggttcaaaa
tctgaaaaactagaaagaaaacacaggcatgaatcaggggactcaagggaaagaccatct
tctggggagcaaaaatcaagacctgacagtcctcgtgttaaacaaggagattctaataaa
tcaagatctggttttaaatcaccaaatagtaaagatgacaaaaggacagagagtaacaag
agcaaagtagacagtaataaggcacaccctgacaataaagcagaatttccaagttacttg
ttaggaggcaggtctggtgcattgaaaaattttgtcattccaaaaataaagagggataaa
gatggcagtattactcaggagacaaagaaaatggaaatgaaaggagagcataaagataaa
gtagaaaaaatgggattagttgaagatctaaataaaggagctaagccagtagttgtcctg
caaaaactgtctttggatgatgttcagaaacttattaaagatagagaggataagtcaaga
agttcccttaaatccatcaggaataaaccatcaaagtctaataaaggtagtatagatcaa
tcagtgttaaaagaattaccccctgaactcctggcagaaatcgaatccaccatgccactt
tgtgaacgtgtgaaaatgaataagcgcaagcgtagcacagttaatgaaaagccaaaatat
gctgaaatcagttcagatgaagataatgatagtgatgaagcttttgaatcttctaggaaa
cgacataaaaaagatgatgataaagcttgggaatatgaagagcgtgaccgaagaagttct
ggggatcatagaagaagtggccactcccatgaaggaagaaggagttcaggtggtggtcgt
taccgaaaccgaagtccgtccgattctgacatggaagattattctcctcctcccagcctt
actgaggttgctagaaaaatgaagaaaaaggaaaaacaaaagaagaggaaagcttatgaa
ccaaaactcacacctgaagaaatgatggattcttcaacttttaagagatttacagcctct
atagagaatattttagataatttagaagatatggattttactgcatttggtgatgatgat
gaaattcctcaggaactgctattaggaaaacatcagcttaatgaacttggcagtgaatct
gctaaaattaaagcaatgggtataatggataagctttcaacagacaaaactgtgaaagtt
ttaaatatcttggagaagaatattcaggatgggtctaagctttccaccttgttaaatcat
aataatgatactgaagaagaagaaagattatggagagaccttattatggagcgagttaca
aaatcagcagatgcttgtcttacaactatcaacattatgacatcccctaatatgccaaaa
gctgtatatatagaggatgtaattgaaagagttatacagtacactaaatttcatttacag
aacacactttatcctcaatatgatcctgtttacagattagatcctcatggaggaggttta
ctaagttcgaaagcaaaacgagctaaatgttctacacataagcagagagtaatagtaatg
ctttacaataaagtttgtgacattgttagcagcttatctgaattactagaaattcagctt
cttacagatacaacaattcttcaggtatcatcaatgggaataacaccattttttgtggaa
aatgtcagtgaactacaattgtgtgccattaagttagttactgcagtgttctcaagatat
gaaaagcatcggcaattaattttagaggaaatttttacttctcttgcaagattaccaacc
agcaagaggagtttaagaaacttcaggttaaatagtagtgatatggatggagaacctatg
tatattcagatggttactgcacttgttttacaacttattcagtgtgtagtacatttacca
tcatcagagaaggactctaattcagaagaggactcaaataaaaaagttgaccaagatgtt
gttattaccaactcttacgaaacagccatgcgaacagcccaaaacttcctttctatcttc
ttgaaaaaatgtggtagtaagcaaggtgaagaagactacagaccactatttgaaaatttt
gttcaagacctcctttcaacagtcaataagcctgaatggccagctgctgaactactcctt
agtttgttagggagactgttggtacatcagttcagtaacaagtcaacagagatggcttta
agagtggcatctcttgattaccttggaactgttgctgctcgattgaggaaagatgccgtt
acaagcaaaatggatcaaggttctattgaacgaattttaaaacaggtttcaggaggagaa
gacgaaatccagcagttgcaaaaagcgttgcttgattatttggatgaaaacactgaaact
gatccttcgttagtgttttcccgtaaattttatatagcccagtggtttcgtgacacaaca
ttggagacagaaaaggcaatgaaatcacaaaaagatgaagaatcatctgaaggagcacat
catgcaaaggaagttgagacaactggtcaaattatgcatcgagctgaaaaccggaaaaag
tttcttagaagtattatcaaaaccacaccttctcagttcagcactttaaagatgaactct
gataccgtggactatgatgatgcttgtttgattgttcgatacttggcctctatgaggcct
tttgcccagagttttgatatttatttgacacagatcctacgagttcttggtgaaaatgct
attgccgtaagaacaaaagccatgaagtgtttatctgaggttgttgctgtagaccccagt
attctagcaaggctggatatgcagcgaggagttcatggaagattgatggataactctact
agtgtcagagaagcagccgtagaattattgggtcgatttgtcctttgtcgacctcagctt
gctgagcagtattatgatatgttgattgaaagaatattggatactggtataagtgtcagg
aaaagggtgataaagattctaagagacatctgtattgaacaaccaacatttccaaaaatt
acagaaatgtgtgtaaaaatgattcgcagagttaatgatgaagagggcataaagaaatta
gtaaatgaaacattccaaaaactctggtttactcctactccacacaatgacaaagaagca
atgacgaggaaaattttaaacatcactgatgtggttgctgcatgcagagatactggctat
gactggtttgagcaactccttcaaaatttgttgaagtctgaagaggattcctcatataaa
cctgtgaagaaagcttgtactcaacttgttgataacctagttgagcacattcttaaatat
gaggaatctctagctgactctgacaataaaggtgtgaattctggaagattggtagcttgc
ataaccactttattcttattcagcaaaataagaccccaactcatggttaaacatgctatg
actatgcaaccgtaccttaccactaaatgtagtacacaaaatgatttcatggttatctgc
aatgttgcaaaaatcctagagcttgttgtaccactaatggagcatccaagtgaaactttc
cttgccactatcgaagaagatctaatgaaacttatcatcaaatatggcatgactgtagta
caacattgtgtgagttgtcttggcgcagttgtaaataaagttacacaaaattttaaattt
gtatgggcctgttttaatagatattatggtgccatttcaaaattaaaaagtcaacaccaa
gaagatccaaataacacttcacttctaacaaacaaaccagcacttcttagatcccttttc
actgttggagcattatgtcgtcattttgattttgatctggaagactttaaaggcaatagt
aaggtaaacataaaggataaagttctggaactattaatgtattttacaaaacattcagat
gaagaagtgcaaacaaaagccatcattggtctaggatttgcctttattcagcatccaagt
ctaatgtttgagcaagaagtgaaaaatctgtataataatattttatctgataagaactcc
tcagtgaatttaaaaatacaagtgctaaaaaatctccagacctacctacaagaagaggat
acacgtatgcagcaggcagatagagattggaagaaagttgcaaaacaagaagacttaaaa
gagatgggagatgtttcctcagggatgagtagttccatcatgcagctttatctcaaacag
gtgcttgaggcattttttcatacccaatcaagtgtacgacactttgctctaaatgtcatt
gcattgactctaaaccaaggtctaattcatccagttcagtgtgtaccttatttaattgct
atgggcacagatccagaaccagctatgagaaacaaggccgatcagcaacttgtggaaata
gacaaaaaatatgctggattcattcatatgaaagcagtggccggtatgaagatgtcttac
caggtacaacaggctattaacacgtgcctaaaagatcccgtaaggggtttcagacaagat
gagtcctctagtgctttgtgctcacatctttactccatgatccgtggaaatcgccaacac
agacgagcctttttaatttctttactcaacctctttgatgacacagcaaaaaccgaagtg
aatatgctcttgtatatagcagacaatctagcctgttttccatatcaaacacaagaagag
ccattgtttataatgcatcatatagatattacactttcagtttctggtagtaacctactg
cagtcattcaaggagtccatggtaaaagacaaaaggaaagagagaaagtcatctccaaat
aaggaaaatgtgtcaagtgagagcgaagaagaagttgccaggcctcggaagtcacgaaaa
cgagtggattctgattctgattctgattctgaagatgatataaattcagtaatgagatgt
ttaccagaaaattcagctcctttaattgaatttgcaaatgtctcccagggtattttattg
cttttgatgttaaagcagcatttgaaaaatctttgtggattttctgatagtaaaattcag
aaatactctccatctgaatctgccaaagtgtatgataaagcgataaatagaaaaacagga
gttcattttcatcccaaacaaacactggacttcttgaggagtgatatggctaattccaaa
atcactgaagatgtgaagaggagtatcgtaaaacagtatctagatttcaaacttctcatg
gaacatctggaccctgatgaagaagaggaagaaggggaggtgtcagctagcacaaatgct
cggaataaagcaattacctcgctgcttggcggaggcagccctaaaaataatgcagcagca
gaaacagaagatgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattg
agaaggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgtt
gacgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcgaccacaaattgca
agagtagtacagaaaaccagcagtggcttcagtgttcagtggatggcaggctcctacagt
ggctcctggactgaggctaagcgccgtgatggccgcaaactggtgccttgggtagacact
attaaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgact
aataaagttgttcagactttacgatccctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
