KEGG   Suncus etruscus (white-toothed pygmy shrew): 126001165
Entry
126001165         CDS       T09902                                 
Symbol
TUBA4A
Name
(RefSeq) tubulin alpha-4A chain
  KO
K07374  tubulin alpha
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04145  Phagosome
setr04210  Apoptosis
setr04530  Tight junction
setr04540  Gap junction
setr04814  Motor proteins
setr05010  Alzheimer disease
setr05012  Parkinson disease
setr05014  Amyotrophic lateral sclerosis
setr05016  Huntington disease
setr05020  Prion disease
setr05022  Pathways of neurodegeneration - multiple diseases
setr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:setr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    126001165 (TUBA4A)
  09143 Cell growth and death
   04210 Apoptosis
    126001165 (TUBA4A)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    126001165 (TUBA4A)
   04540 Gap junction
    126001165 (TUBA4A)
  09142 Cell motility
   04814 Motor proteins
    126001165 (TUBA4A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    126001165 (TUBA4A)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    126001165 (TUBA4A)
   05012 Parkinson disease
    126001165 (TUBA4A)
   05014 Amyotrophic lateral sclerosis
    126001165 (TUBA4A)
   05016 Huntington disease
    126001165 (TUBA4A)
   05020 Prion disease
    126001165 (TUBA4A)
   05022 Pathways of neurodegeneration - multiple diseases
    126001165 (TUBA4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:setr03019]
    126001165 (TUBA4A)
   03036 Chromosome and associated proteins [BR:setr03036]
    126001165 (TUBA4A)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:setr04812]
    126001165 (TUBA4A)
   04147 Exosome [BR:setr04147]
    126001165 (TUBA4A)
Messenger RNA biogenesis [BR:setr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126001165 (TUBA4A)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     126001165 (TUBA4A)
Cytoskeleton proteins [BR:setr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    126001165 (TUBA4A)
Exosome [BR:setr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126001165 (TUBA4A)
  Exosomal proteins of other body fluids (saliva and urine)
   126001165 (TUBA4A)
  Exosomal proteins of colorectal cancer cells
   126001165 (TUBA4A)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 126001165
NCBI-ProteinID: XP_049624329
LinkDB
Position
2:32077539..32081474
AA seq 448 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctccgtgcacgtagggcaggcaggtgtccagatgggcaatgcctgc
tgggagctctactgcctggagcacgggatccagcctgatggacagatgcccagtgacaag
accatcgggggaggggacgattccttcaccaccttcttctgcgagacaggggctggaaag
catgtgccgcgggcggtgtttgtggatctggagcccactgtgattgatgagatccgaaat
ggcccctaccggcagctcttccaccccgagcagctcattactggcaaggaggatgctgcg
aacaactatgcccgaggtcactacaccattggcaaagagatcatcgaccccgtcctggac
cggatccgtaaactggccgaccaatgcacaggcctacaaggcttcctggtcttccacagc
ttcggagggggcactggctctggcttcacctcactcctcatggagcgcctctctgtcgac
tatggcaagaaatccaagctggagttctccatctacccggccccccaggtgtccacagcc
gtggtggagccctacaactccatcctcaccacacacaccaccctggagcactccgactgt
gccttcatggtggacaacgaggccatctacgacatctgtcgccgcaatctggacatcgag
cggcccacctacaccaacctcaaccgcctcataagccagatcgtgtcctctatcactgca
tccctgcgcttcgatggggccctcaatgtggacttgaccgagttccagaccaatctggtg
ccatacccccgcatccacttccccctggccacctatgcgcctgtcatctctgccgagaag
gcctaccatgagcagctgtctgtggctgagatcaccaatgcctgcttcgaaccggccaac
cagatggtgaagtgtgacccccgtcatggcaagtacatggcctgctgcctgctgtaccgt
ggggatgtggtccccaaggatgtcaatgccgccattgccgccatcaagaccaaacgcagt
atccagttcgtagactggtgccccacgggcttcaaagtgggcatcaactaccagccccct
acagtggtgcctgggggggacctggccaaggtgcagcgtgccgtgtgcatgctgagcaat
accactgccatcgccgaggcctgggcccgcctggaccacaagtttgacctgatgtatgcc
aagagggcgtttgtgcactggtatgtgggtgagggcatggaggagggtgagttctctgag
gcccgggaggatatggctgccctggagaaggattacgaggaagtgggcatcgactcctac
gaggatgaggatgagggggaagaatag

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