Suncus etruscus (white-toothed pygmy shrew): 126001171
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Entry
126001171 CDS
T09902
Name
(RefSeq) ATP-binding cassette sub-family A member 6-like
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126001171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126001171
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
126001171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_15
AAA_22
nSTAND1
MMR_HSR1
SMC_N
DUF4162
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
126001171
NCBI-ProteinID:
XP_049624340
LinkDB
All DBs
Position
1:complement(198971604..199037661)
Genome browser
AA seq
1609 aa
AA seq
DB search
MLIKQKSLFQQTQALLCKNLLVKWRSKGETALELGIPILLGLYVGLFFYFQYYSHFPGMP
PRDLGRLDQFNSSLNVVYAPISKLTQQIMNQTILAPFMTGVKVIGAANETHLDKIIEDNL
SDAAGIVFNDMTSYHLKFYQGYFIPSVKADEFTAYCFDMYDRLLCSLDKYWTRGFMPLQT
AINVAIIQILTNHSVMEQLMSVTAIDMKTLPFVAKDFLQNELFLLYCLLYFSPMVYFLSI
NITKERKKKKDLMKMMGLQDSAFWFSWGLLYAIFIFIISIIFTIIIKETDTIMMTNFTVI
FTLFFLYGTNLIALTFLMTVLIKRTALTTLVTFSFTIFWGGLGFTAYYRQLPASLEWILC
IFSPFAFIAGMTQIIHQDYNMSGVTFPDPSGSSYSMIATFSLLAFDTFLYLVLTLYFDKI
LPYENNGCYSALFFLNSLPCLKQQRTDHKIIENETETEHSSDDNFEPIPPEYQGKEVIRI
SNIKKEYKGKSGKVEALKGLSFDIAEGQITAILGQNGAGKSSLLNILSGLSAPTEGSVTI
YNKNLSDKQDLEEIKKIIGICPQNSAEFDLLTVKENLKLFAKIKGIQSQVIEQEIQRILL
ELDIQNIQDQLAQHLNEGQKRKLTFGIAILGDPRVLLLDEPTVGVDPFSRHRIWSFLKEH
KNDRVILLSTNFLDEVDYVADRKVIMSNGRIKSVGSSEFLKRRWGLGYNLSLYRNETCDP
EKITSFIHHHIPEAKLKAESKEKLVYSLPLEKTNAFPELFSDLDKGSGPGVMSYDVSIST
LNEIFTKLERGTTIQPDFEHAEVVGNIENLNDMNPANFSSTVSRKAVSPMYLWRMQVCAM
AKLRFLKLKRERKELLTLLFVFGIALYPLVMEKAIRGVLAEETNWELKSDLYFLSPGQLP
QETRTTLLIINNTESNIEDFIQSVKQQNILLEIDDFKNRNGTEELSYNGVIIVSGKQKDY
RFSIVCNTKRIHCFPILMNIISNGVLRMLNNTQYIRIGRGSFQMPFMMDIVGLPESTMFV
VLALCNIFPYIAMSSVSDYQKGCKSQLWISGLFPSAYWCGQALVDIALYGSFLLFVYILV
FVEKLISFHITGRVVFALFVISLGYVTSMIFMTYMISFIFRKRKRNSGIWSFVFYFIMLI
MFGIIFWPTNRMTTFIIILLLFPNMGIIEFLSILLENITVSLLLPCVQALVFLFILRCLE
MKYGKKILQRDPIFRISPQRRGTQHNSEYPRDEDEDEDVHAERTRTATALTTSNSEEKPV
ILASCLHKEYVGQKKYCFLKRKKNVATKSISFCVQKGEILGLLGPTGAGKSSCMKMISGA
MKPTAGEVELNDYCSDWDQPEGNQVKVLGYCPQKNVLWSRLTVKEHLQVFASVKGLNKND
ATTAILRLVNAFKLHEQLNVPVCKLTAGATRKLCFLLSILGDPPILLLDEPSTGVDSMDQ
LQMWKTIQGTIKNTGKGALIVTHHLAEAEALCDRIAIMVSGKLRCIGSIQHLKRKFGKDY
TLKIKVKETSQLNSVNTEILKLFPQAIQQERYAFFLTYKLPMMDVQPLSQAFHKLEAVKH
NLNLDEYSLSQCTLEKVFLELSKEQLLVESDEEVGTTVRWRLLPYSDEA
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgcttataaaacagaaaagtttgtttcaacaaacccaagcacttctgtgcaagaatctt
cttgtgaaatggagaagtaaaggagaaactgccttggaattggggattccaatacttcta
ggactctatgtgggtctatttttttattttcaatactatagtcattttcctggaatgccc
cctcgggatctgggaagactggatcaatttaatagctctctaaatgttgtatatgcaccg
atatctaagctaacccagcagataatgaatcaaaccatccttgctcccttcatgacagga
gtaaaagtcattggagcagcaaacgaaacacatctggataaaatcattgaggataactta
tctgatgcagcaggaatagtcttcaatgacatgacttcttatcatttaaaattttatcag
ggatatttcataccatccgtgaaggcagatgagtttacagcttattgttttgatatgtat
gatagacttttgtgttcactggacaaatactggaccagaggattcatgcctttacagact
gccatcaatgttgctattatacaaatcctgacaaatcattctgtgatggagcagttaatg
tctgttacggctatagatatgaagacattaccttttgtagctaaagactttcttcaaaac
gaattatttcttttatattgcttgctttacttctctccaatggtatactttttatctatc
aatataacaaaagagagaaaaaagaagaaggacttgatgaaaatgatgggtcttcaggat
tcagcattctggttctcttggggattactatatgctatcttcattttcattatttccata
atctttacaataatcataaaagagacagacacgataatgatgaccaatttcacggtcata
tttacactcttctttttatatggcaccaatttgatagctttaaccttcctgatgactgtc
ctgatcaagagaactgccctcacgactttggtgacattttctttcaccatcttctggggt
ggtctgggattcacagcctattataggcaacttcctgcatccctggagtggattttgtgt
atctttagtccctttgcctttattgctggaatgactcagattattcaccaggattataat
atgagtggtgtaacttttcctgacccttcaggatcctcctatagcatgatagcaacattt
tcattattggcttttgatacttttttgtacttggtattgactttatactttgacaaaatc
ttaccttatgaaaataatggctgttattctgcgttatttttcctgaattcattaccttgt
ctcaaacaacaaagaactgatcataagattattgaaaatgaaacagaaactgagcattca
tctgatgataattttgaaccaatacctccagaatatcagggaaaagaagttatcagaatc
agtaatattaaaaaagaatataaaggaaagtctgggaaagtggaagccttaaaaggtttg
tcctttgacatagctgaaggtcaaatcacagccattctgggtcagaatggagctggcaaa
tcttcattactaaacattctcagtggattatctgctccaacagaagggtcagttaccatc
tataataaaaatctttctgataagcaagacttggaggagataaaaaagatcattggtatt
tgtccacagaacagtgctgaatttgacttgctcacagtcaaggaaaacctcaagctattt
gctaaaatcaaaggcattcagtcacaagtcatagaacaagagatacaaagaattttgctg
gaattggacatacaaaacatccaggatcaacttgctcaacacttaaatgaaggacagaaa
agaaagttgacctttggaattgccattttaggagatcctagagtcctgttattagatgag
ccaactgtgggagtggatcctttttcaaggcatcgaatatggagtttccttaaagagcac
aaaaatgatcgcgtgattcttttgagtaccaattttctggatgaggttgactacgtggct
gatagaaaagtaatcatgtctaatgggagaatcaagagtgtgggttcttctgaatttttg
aagagaagatggggtcttggctataacttgagtttgtacagaaatgaaacatgtgaccca
gaaaaaataacatcctttattcatcatcacatccctgaagctaaattaaaagcagaaagc
aaagaaaaacttgtatactcactgcctttggaaaagacaaatgcatttccagaacttttc
agtgatctggataagggttctgggccaggtgtgatgagctatgacgtttccatatcaaca
ctgaatgaaatcttcacaaaactggaaagaggaacaactatccaaccagattttgaacat
gcagaagtggtgggaaacatagaaaatctgaatgacatgaatccagctaacttttcatcc
actgtgtcaaggaaagctgtgagccccatgtatctgtggagaatgcaggtctgtgcaatg
gccaaactccgtttcttaaaattaaagcgtgaaagaaaagagcttttgaccctattgttt
gtatttggaattgcattgtaccctttagttatggaaaaggcaatccgtggtgtcctagct
gaagagactaattgggaactgaaatctgatttgtattttctctctcctggacaacttccc
caagaaactcgtactaccctattgatcatcaataatacagaatcaaatattgaggatttt
atacagtcagtgaaacaacaaaatatactcctggaaatagatgactttaaaaatagaaat
ggcactgaggaactatcatacaacggtgttatcatagtttctggtaaacagaaggattat
agattttcgattgtgtgcaacaccaaacggatccattgttttcctatccttatgaacatt
atcagcaatggagtacttcgaatgcttaataacacacaatatattcgaattggaagaggc
agttttcaaatgccatttatgatggacattgtagggctgccggaaagtaccatgtttgtg
gttttggcgctctgcaacatttttccttacattgccatgagcagtgtcagcgattaccaa
aaaggttgcaagtcccagttatggatttccggcctctttccttctgcttactggtgtgga
caggcattggtggatattgccctttatggttctttccttctttttgtttatatacttgta
tttgttgaaaagttgataagctttcatataacaggacgagttgtatttgctttgttcgta
atttcccttggttatgtaacttctatgatcttcatgacatatatgatatcatttattttt
cgcaagaggaaaagaaatagtggcatttggtcatttgtcttctattttatcatgctcatc
atgtttggtatcattttttggcctacgaatcgcatgactacttttattattatcttgcta
ttatttcctaacatgggcataattgaatttctcagtatccttctagagaacataactgtt
tctttactcctgccttgcgttcaggctttggtgttcctctttattctaagatgcctggaa
atgaagtatgggaagaaaatattgcaaagagatcctattttcagaatttctccccagaga
agaggtacacagcacaattctgagtatcccagagatgaagatgaagatgaagatgttcat
gcagaaagaaccagaacagcaactgccctgaccacttcaaactcggaagagaaaccagtc
atacttgcaagttgtctacacaaagaatatgtgggccagaaaaaatattgctttttaaag
agaaagaagaatgtagctacaaaaagtatctctttttgtgttcaaaaaggtgaaattttg
ggattactgggacccactggagctggtaaaagctcatgtatgaaaatgatatctggagct
atgaagccaacagctggagaggtggaactgaatgactattgctcagattgggatcaacca
gaaggcaatcaagtcaaggtcctggggtactgccctcaaaagaatgtgctgtggtccagg
ctgacagtaaaggagcacctgcaggtgtttgcctcagtgaagggactcaacaaaaatgat
gccaccactgccattttaagattggtgaatgctttcaaattgcacgaacaactgaatgtt
ccagtgtgtaagttaacagcaggagctacacggaagttgtgttttctgctgagtatcctg
ggagacccacctatcctgctcctggatgaaccttccacaggggtggattcaatggatcag
ctacaaatgtggaagactattcaaggaaccattaaaaacacagggaagggggctctcatc
gtcactcatcacctagctgaggctgaggccttgtgtgaccgtattgccatcatggtgtca
ggaaaacttagatgcattggctccatccaacatctgaagagaaaatttggcaaagattac
accctaaaaatcaaagtgaaagaaacttctcaattgaattctgtcaatactgagattctg
aagctttttccacaggctattcagcaagaaaggtatgccttcttcctgacctataaactg
cccatgatggatgttcagccgttgtctcaggcttttcacaaattagaagctgtgaagcat
aatttgaacttggatgaatacagcctctctcaatgcaccctagaaaaggtattcttagaa
ctttccaaggagcagctgctggtagaatctgatgaagaagttggcacaacggtcagatgg
agactgttaccttattcagatgaagcttaa
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