Suncus etruscus (white-toothed pygmy shrew): 126001174
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Entry
126001174 CDS
T09902
Symbol
CDH12
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126001174 (CDH12)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Major cadherins
126001174 (CDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Cadherin_4
DUF443
Motif
Other DBs
NCBI-GeneID:
126001174
NCBI-ProteinID:
XP_049624339
LinkDB
All DBs
Position
2:78192675..79221928
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AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLQPQPQQTLATEPRENVIHLPGRRSHFHRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQ
NAEIEYNIVPGDGGNLFDIMTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SAGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKSDGDSYFTIDGTDGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNILINVL
DVNEFPPELSMPYETAVCENAKAGQIIQIVSASDRDLSPAGQQFSFRLSPEAAIKPNFTV
RDFRNNTAGIEARKNGYSRRQQELYFLPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDSLRLPRQRPSVEDNTDIRDFINQR
LQENDVDPSAPPYDSLATYAYEGNGSTAESLSSIDSLTTEADQDYDYLTDWGPRFKVLAD
MFGEDENHSPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgtttatcccttcttctctgggtcctatttgatggaggtctccta
acaccacttcaaccacagccacaacaaactttagccacagaaccaagagaaaatgttatt
cacctgccagggcggagatcacattttcaccgagttaaacgtggctgggtatggaatcag
ttttttgtgctggaggaatacatgggctccgagcctcagtatgtgggaaagctccattct
gacttagataaaggagaaggcactgttaaatataccctatcaggagatggcgctggcaca
gtctttaccattgatgaaaccacaggggacattcatgcaataaggagtctggacagagaa
gaaaagcctttttataccctccgtgctcaggcagtagacatagagaccagaaagcccctg
gaacccgaatcagaattcatcatcaaagtacaggatattaatgataatgagccaaagttt
ttggatggaccttatgttgctagtgttccagaaatgtctcctgtgggtgcctatgtgctc
caagttaaggccacagatgcagatgacccgacttatgggaacagcgccagggtcgtttac
agcattcttcagggacaaccttatttctctattgatcccaagacaggtgttattagaaca
gctttgccaaacatggaccgggaagtcaaagaacaatatcaagtcctcattcaagctaag
gatatgggcggacaactgggagggctggctggaaccaccatcgtgaacatcaccctcact
gacgtcaatgacaatccacctcgattccccaaaagcatcttccatttgaaagtcccagag
tcatctcctatcggctcagctattgggagaatacgagctgtcgatcctgattttggacaa
aatgcagaaattgaatacaatattgttccaggagatggaggaaatttatttgatattatg
acagatgaggatactcaagaaggagtcatcaaattaaaaaagccactggattttgaaacg
aagaaggcttatacgtttaaagtggaagcctccaaccttcacctggatcatcgctttcac
tctgcgggcccctttaaagacacggccacagtgaagattagcgtattggatgtggatgag
ccccctgtgtttagcaaaccactgtacaccatggaagtgtatgaagacacccccgtgggc
accatcatcggagctgttactgcacaagaccttgatgtgggcagtagtgcagttaggtac
ttcatagactggaagagtgatggggacagctactttacaatagatggcacggacggaacc
atcgctactaatgaattactagaccgagaaagcactgcccagtataatttctccataatt
gcgagtaaagttagtaatcctttattaactagcaaggtcaacatattgattaatgtccta
gatgtcaatgaatttcctccagagctctctatgccctacgagacagctgtatgtgaaaat
gccaaagcaggacagatcattcagatagtgagcgcttcagacagggatctctcgcctgct
gggcaacagttttcctttagattatcacctgaagctgccatcaaaccaaattttactgtt
cgtgacttcagaaacaacacagctggaattgaagccagaaagaatggctacagtcgcagg
cagcaagagttgtatttcctcccagttgtaatagaagacagcagttatccagtccagagc
agcacaaatacaatgactataagagtttgcagatgtgattctgatggtaccatcttgtct
tgtaatgtggaagcaatttttctacctgtaggactcagcaccggggctttgatcgcaatc
ctactgtgcattgtcatactcttagccattgtagtgctgtatgtagctctgagaagacag
aaaaagaaagacactctgatgacctccaaagaagacatcagagacaacgtgatccattat
gatgacgaaggaggtggggaggaggacacccaggctttcgacattggtgctctgagaaat
cctaaagtgatcgaagataacaaaatccgcagggatatcaaaccagactctctccgttta
cctcgccagagaccatccgtggaagataacacagacataagggatttcattaatcagagg
ctacaggaaaatgatgtggaccccagcgcaccaccatacgactcattggccacatatgcc
tatgaaggaaatggctctaccgcagagtcccttagttccatagactccctcaccacagag
gccgaccaggactatgactatctgacagactggggacctcgctttaaagtcctggcagat
atgtttggagaagatgagaaccatagccctgataaagtcacttag
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