Suncus etruscus (white-toothed pygmy shrew): 126001210
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Entry
126001210 CDS
T09902
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126001210
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126001210
Enzymes [BR:
setr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126001210
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126001210
Ubiquitin system [BR:
setr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126001210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
START
Motif
Other DBs
NCBI-GeneID:
126001210
NCBI-ProteinID:
XP_049624376
LinkDB
All DBs
Position
2:complement(45691271..45699906)
Genome browser
AA seq
2559 aa
AA seq
DB search
MTATTHGSPVGGNESQGQAPDGQSQPPLEQNQTSSPASSHENSPATPPDEQGQGDAPPQV
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNP
HCKFHIYNGTRPCESVSSNVQLPEDEHFARSPDPRSPKGWLVDLLNKFGILNGFQTLHDR
FINGSALNVQIIAALIKPFGQCYEFLTLNTVKRYFLPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSSYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFLPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKVGVMAHKVLNLLWNLAHSDDVPVDMMDLALSAHIKILDYSC
SQDRDTLKIQWIDRFVEELRKNDKWVIPALKQIREICSLFGEAPQNLSSSRLSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLATYMESMRLYARDQEVYDPQTVRLGSRYSHVQEVQ
ERLNFLRFLLKDGQLWLCSPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDI
NKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLW
RVVIQSNDDIACRAIDLLKEIYTNLGPRLQVNQVTIHEDFIQSCFDRLKAFYDTLCVLDG
DKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPLSRAFRGKHLSFIVRFPNQ
GRQVDDLDVWSHTNDTIGSVQRCILNRIKANVAHTKIELFVGGELIDPADDRKLIGQLNL
KDKSLITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHP
RYISFLWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHVKLGESSLSPS
LDSLFFGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLSLVLSMLSRNNF
LPNADMETRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPGVEGVNTLTSVTQVTHDQA
VVLQSALQSIPNPSSECMLRNVSIRLAQQISDEASKYMPDICVIRAIQKIIWASGCGALQ
LVFSPNEEITKIYEKTNAGNEPDLEDEQVCCEALEVITLCFALIPTALDALSKEKAWQTF
IIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFINLLFTFLGSTARERGKHSGDY
FTLLRHLLNYAYNSNINILIAEVLLNNEIDWLKSIRDDVKRTGETGVEETILEGHLGVTK
ELLAFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCGSP
ATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKG
FVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDSESNVDPRD
DVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEECNKKVDTVKRLLIKKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVEGVAKLEGDNVNPESQLIQQNEQSES
EAAGSTKYRLVGVLVHSGQASGGHYYSFIIQRNGGDSERNRWYKFDDGDVTECKMDDDEE
MKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQGDELVRYLSELSVS
TRPHQFTMPSAIERSVRKQNVQFMHNRMQYSLEYFQFMKKLFTCNDVYLNPPPGQDHLLP
EAEEITMISIHLAARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFN
VSNRFSEYLLECPSAEVRGAFAKLIVFIAHISLQDGPCPSPFASPGPSSQAYDNLSLSDH
LLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPG
PPIKYQYTELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDANLSQPIMPLQQNV
ADILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRP
YLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALF
SNCPVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTSNPQYTYNNWSPPVQSNETSNGY
FLERSHSARMTLAKACELCPEEESDDQDAPDEHESPPPKDAPLYPHSPGSQYQKNNHVHG
QPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcatggctctccagtaggggggaatgagagccagggccaggctccg
gatggacaatcacagccccctcttgaacaaaatcagacttcatcgcctgcttcttcccat
gaaaattccccggcaactcccccagatgaacaaggtcagggtgatgccccaccacaagtc
gaagatgaggaacctgcgtttccacatactgacctagcaaagttggatgacatgattaat
aggcctcgatgggtggttccagttttgccaaaaggggaattagaagtgcttttagaagca
gctattgaacttagtaaaaaaggccttgatgttaaaagtgaagcgtgccagagatttttt
cgagatggattaacaatatcattcactaagatccttacagatgaggctgtgagtggatgg
aagtttgaaattcacaggtgtattatcaacaatactcatcgcctggtagagctatgtgtg
gccaagttatcccaagattggttcccacttctagaacttctctccatggccttaaatcct
cattgcaaattccatatctacaacggtactcgtccatgtgaatctgtttcttccaatgtt
cagttgcctgaagatgaacactttgctcgttctccagaccctcgatcaccaaaaggttgg
ctagtggatcttctaaacaaattcggcattttaaatgggttccagacactgcatgatcgt
ttcattaatggatcagcattaaatgttcagataattgcagctcttattaaaccatttggg
cagtgctatgagtttctcactcttaatacagtgaaaaggtactttctcccagtaatagaa
atggttccacagtttttagaaaacttaactgatgaagaattgaaaaaagaagcaaagaat
gaagcaaaaaatgatgctctttcaatgattattaaatcattgaagaatttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatattcaggctaaaaatgatactc
agattgttgcagatttcctcttttaatgggaagatgaatgcactgaatgaagttaataag
gtgatatcgagtgtgtcatcttatactcatcgtcatggtaatcctgaggaggaagaatgg
ctcacagctgaacgaatggctgaatggatacagcagaacaatatcttatccatagtcttg
cgagacagtcttcatcaaccacagtatgtagaaaagctagagaaaattcttcgtttcgtc
attaaagaaaaagctttgactttacaagatcttgataatatctgggcagcacaggcaggg
aagcatgaagctattgtgaagaatgtgcatgatcttctggcaaagctggcatgggatttt
ttacctgaacaacttgatcatctctttgattgctttaaggccagctggacaaatgcaagt
aaaaagcaacgggaaaagctgcttgaactgattcgtcgccttgcagaagatgataaagtt
ggtgtgatggcacacaaagtgttgaatttactgtggaatctggcccacagtgatgatgtt
cctgtagacatgatggacctggcactcagtgcccacatcaaaatactagattatagttgt
tcccaagatcgtgacacactaaagatccagtggatagatcgtttcgttgaagaacttcgt
aaaaatgacaaatgggttattcctgcactgaaacaaattagagaaatttgtagtttgttt
ggtgaagcacctcaaaatttaagttcttctcgtctcagtcaaactcagcgaagtccccat
gtattttatcgccatgacttaatcaatcaacttcagcacaatcatgccctagttactttg
gtagcagaaaaccttgcaacttacatggaaagcatgagactgtatgctagagaccaggaa
gtttatgatccacaaactgtgaggctgggaagtagatacagtcatgttcaagaagtccaa
gaacgacttaacttccttagatttttattgaaggatggccaactatggctatgttctcct
caggcaaaacaaatatggaaatgcttagcagaaaatgcagtttacctttgtgaccgggag
gcctgttttaagtggtattcaaaattgatgggggatgagccagacttggatcctgatatt
aataaggacttctttgaaagtaatgttcttcagcttgatccttccctcctaactgaaaac
ggaatgaaatgttttgagcgattcttcaaagctgtaaattgtcgagaaggaaaactcgta
gcaaaacggagagcatatatgatggatgatttggaattaataggtttagactacctttgg
agggttgtgattcagagtaatgatgatattgcctgcagagctatagatctactcaaagaa
atatatacaaatcttggtccaaggctgcaggtcaatcaggtgacgatccatgaagatttc
attcagtcttgctttgatcgtttgaaagccttttatgacacactttgtgttttggatggt
gacaaagacagtattaattgtgcaagacaagaagctgttcgcatggttcgagtattaact
gttctaagagaatatataaatgaatgtgatagtgattatcatgaggaaagaacaattcta
cctttgtcaagagcttttcgtggtaaacacctctcttttatagttagatttccaaaccaa
ggcaggcaggttgatgacttggatgtgtggtctcataccaatgatacaattggttcagta
caaagatgtattctcaatcgtattaaagccaatgtagcacatacaaaaattgaacttttt
gtgggtggtgaactgatagatcctgcagatgacagaaagttgattggacagttaaactta
aaagataaatcgctaattacagccaaacttacacaaataaattccaatatgccttcaagc
cctgatagttcttctgattcctcaactggatctcctggaaaccatggtaatcattacagt
gatggtcccaatccagaagtggaaagctgtttgcctggtgtgataatgtcactgcaccca
agatacatctcttttctgtggcaagttgcagatttgggtagcagcctaaatatgccacct
cttagagatggagcaagagtacttatgaaacttatgccaccagatagcacaacaatagaa
aaattaagagctatttgcttagatcatgtcaaacttggagaaagcagccttagtccatca
cttgactcacttttctttggcccttcagcctcacaagtgctatatctaacggaggttgtc
tatgccttgttgatgcctgctggtgcacctctagctgatgattcctctgattttcaattt
catttcttgaagagtggtggcctatcccttgtcctgagtatgctatccagaaataacttt
ctaccaaatgccgatatggaaactcgaaggggtgcctacctcaatgctcttaaaatagcc
aagttgttgctgactgctattggctatggccatgttcgagctgttgcagaagcttgccag
ccaggtgtagaaggcgtgaataccttgacatcggtcacccaagttactcatgatcaagct
gtggtgctacaaagtgcccttcagagcattcctaacccgtcatctgagtgtatgcttaga
aatgtgtcaattcgccttgctcagcaaatatctgatgaggcttcaaaatatatgcctgat
atttgtgtaattagagccatacagaaaattatctgggcatcaggatgtggggcattgcag
cttgtgtttagcccaaatgaagaaatcactaaaatttatgagaagaccaatgcaggcaat
gaaccagacttggaagatgagcaggtttgctgtgaagcattggaagtgataacattatgt
tttgccttgattccaacagccttagatgctcttagtaaagaaaaggcatggcagacattt
attattgacttactgttgcactgtcatagcaaaactgttcgccaggtggcacaggagcag
ttctttttaatgtgcaccagatgttgcatgggacacaggcctctgcttttcttcattaat
ctgctctttacctttttggggagcacagccagagaaagaggtaaacattcaggcgactac
ttcactcttttaagacacctcctcaattatgcttacaatagtaatattaatatactgatt
gctgaagttcttcttaataatgaaatagattggcttaaaagtattagggatgatgttaaa
agaacaggtgaaactggtgttgaagagaccatcttagagggccaccttggagtaacaaaa
gagttactggcctttcaaactcctgagaaaaagtaccatattggttgtgaaaaaggaggt
gctaatctcattaaagaattgattgatgattttatcttccctgcatctaatgtttacctg
caatatatgagaaatggagaactgcctgcagaacaggctattccagtctgtggttcacca
gctaccattaatgctggttttgaattacttgtagcattagctgttggctgtgtgaggaat
ctcaaacagatagtagattctttgactgaaatgtattatattggcacagcaataactacc
tgtgaagcacttactgaatgggaatatctgccacctgttggaccccgcccaccaaagggc
ttcgtaggtctgaagaatgctggtgctacttgttacatgaactctgtgatacagcaactc
tacatgattccttccatcaggaatggtattcttgcaattgaaggcacaggtagtgatgtt
gatgatgatatgtctggggatgagaagcaagacagtgagagcaatgttgatcccagagat
gatgtctttggttatcctcaacaatttgaagacaaaccagcattaagcaaaacagaagat
aggaaagaatacaacattggagttctaagacatcttcaggtcatctttggacatttagct
gcttctagactacaatactatgtgcccagaggattttggaaacagtttaggctttggggt
gaacctgttaatctgcgtgaacaacatgatgctttagaattttttaattcattggtcgat
agtttagatgaagctttgaaagcattaggtcatccagctatgctgagtaaagtcttagga
ggttcctttgctgatcagaagatttgccaaggctgtccacatagatacgagtgtgaagaa
tcttttacgactttgaatgtagacattagaaatcaccaaaatcttcttgattctctggaa
caatatgtcaaaggagatttattagaaggtgcaaatgcatatcattgtgaagaatgcaat
aaaaaggttgatactgtaaagcgcttgctaattaaaaaattgcctcctgttcttgctatc
caacttaaacgattcgattatgactgggaaagagaatgtgcaatcaagttcaatgattat
tttgaatttccgcgagagctagacatggaaccttacacagttgaaggtgttgcaaaactg
gaaggagataatgtaaaccctgagagtcagttgatacaacagaatgagcaatctgaaagt
gaggctgcaggaagcacaaaatacagacttgtgggtgtgctcgtacacagtggtcaagca
agtggaggacattattattctttcattattcaaaggaatggtggagatagtgagagaaat
cgttggtataaatttgatgatggagatgtaacagagtgtaaaatggatgatgatgaagaa
atgaaaaaccagtgtttcggtggagaatacatgggagaagtttttgatcatatgatgaag
cgtatgtcatacagacgacagaaaaggtggtggaatgcttatattcttttttatgaaaga
ttggacacaatagaccaaggtgatgaattagtaagatacctatcagagctttctgtctcc
acaagaccccatcagttcactatgccatcagccattgaaagaagtgtacggaaacagaat
gtgcaattcatgcataaccgaatgcaatatagtttggaatattttcagtttatgaaaaaa
ctgtttacatgtaatgatgtatacttaaatcctcctccagggcaagatcatctgttgcct
gaagcggaagaaatcaccatgataagtattcatcttgctgctaggttcctttttaccaca
ggatttcataccaagaaaatagtccgtggctctgccagtgattggtatgatgcattgtgt
attctccttcgtcacagcaagaatgtacggttttggtttgcacataatgtcctttttaat
gtttcaaaccgcttttctgaataccttctggagtgcccaagtgcagaagtgaggggtgca
tttgcaaaacttatagtttttattgcacacatttccttgcaagatgggccatgtccttca
ccatttgcttctcctggaccttcaagtcaggcttatgacaacttaagcctaagtgatcac
ttactaagagcagtactaaatcttttgagaagggaagtttctgagcatgggcgtcattta
cagcagtatttcaacctatttgtaatgtatgccaatttaggtgtggcagaaaagacacaa
cttctaaaactgagtgtgcctgctacctttatgcttgtgtctttagatgaaggtccaggt
cctccaatcaaatatcagtatactgaattaggcaaattatattcggtagtgtcacagctg
atccgttgttgtaatgtttcatcaagaatgcagtcttcaatcaatggcaatcctcctctt
cctaatccttttggtgatgcaaatttatcacaacctataatgccacttcagcagaatgtg
gcagacattttatttgtaagaacaagttatgtgaaaaaaatcattgaagactgcagtaac
tcagaagaaaccatcaaattgctacgtttttgctgctgggaaaatcctcagttttcatct
actgtcctcagcgaactactctggcaggttgcatattcctatacctatgaactccggccc
tatttggatctgcttctacaaatcttactgattgaggactcttggcagactcacagaatt
cataatgtacttaaaggaataccagatgaccgagatggactatttgacacaatccaacgc
tctaagaatcattatcaaaaaagagcataccagtgtataaaatgtatggtagctctcttc
agcaattgtcctgttgcctatcaaattcttcagggtaacggagatcttaaaagaaagtgg
acctgggcagtggaatggcttggagatgaacttgaaagacggccatacacgagcaatcct
cagtacacatataacaattggtctcctccagttcaaagcaatgaaacatcaaatggttat
ttcttagagagatcacatagtgcaaggatgacacttgcaaaagcttgcgagctctgtcct
gaggaggagtcagatgaccaagatgccccagatgagcatgagtcacctccacctaaagat
gctccattgtatccccattctcctggatctcagtatcaaaagaataaccatgtacatgga
cagccatatacgggcccagcagcacatcacatgaacaaccctcagagaactggccagcga
gcacaagaaaattatgaaggcagtgaagaagtatctccacctcagacaaaggatcaataa
DBGET
integrated database retrieval system
