Suncus etruscus (white-toothed pygmy shrew): 126001219
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Entry
126001219 CDS
T09902
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126001219 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126001219 (ABCA3)
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126001219 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
RsgA_GTPase
AAA_22
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
126001219
NCBI-ProteinID:
XP_049624388
LinkDB
All DBs
Position
2:complement(6197399..6224038)
Genome browser
AA seq
1702 aa
AA seq
DB search
MAVLRQLGLLLWKNFTLQRRKVLVTVLELVLPLLFSGIMIWLRLKIQSENVPSATIYPHQ
NIQKLPLFFSFPPPGGTWELVYIPSHSQAVKGIAQAVSQKLTLDFRVHGFPSEKEFEDYI
RYDNRSSDVLAALVFEHPFEYSQDPLPLAVQYHLRFSYTRRNYMWAQSDSGLPKDTEGWH
TRSLFPLFPSPGPREPAAPDGGEPGYIREGFLAVQHAVDRAIMEYHAGAAARGLLEQVTV
QAKRFPFPPFTSDPFIVAVQYQLPLLLMLSFTYTALTIVRAVVQEKERKLKEYMRMMGLS
SWLHWSAWFLLFFLFLLVIVSFMTLLFCVRVKKDVAVLVHSDPSLVLVFLACFAISTISF
SFMVSSFFSKANMAAAVGGFLYFLTYIPYFFVAPRYNGMTQNQKLLSCLLSNVAMALGAQ
LLGKFEAKGVGVQWRDLLNPVTVDDDFSFGHALGMLLLDSVLYVLVAWYVEAVLPGQFGV
PQPWYFFLLPSYWCRGSRTALGKEDEDPEKALRSEYFEAEPEDLVAGIKIKHMSKLFRVG
SKSKAAVSNLSLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYISGYEITQDMA
QIRKSLGLCPQHDVLFDNLTVAEHLSFYAQLKGLSQHKCPEEVKRLLHILGLEDQQDTRS
RFLSGGTKRKLSIGIALIAGSKVLMLDEPTAGMDAVSRRAIWDILQQQKRTRTILLTTHF
MDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEAQCDPEAITQLVWQHVP
SATLESSAGAELSFILPKESTHRFEGLFTKLEKQQKELGIASFGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRASDWAVGSQLCGVMDSTDSIGALIQEEGGTFQLNSGLA
LHAQQFWAMLLKKAMFSWREWRLAAAQVLVPLSCITLALLSIDYSAQILDDPLLRLTLSE
YGRTVVPFSVPSPSRLSPQLAEHWKDMLQAEGQEPREVLGDLEEFLIFRASVEGGAFNEH
CLAAASFQAEGSRTVITALFNNQAYHTPATALALVDNLLFRLLCGPQASITISNYPQPRS
TLQVAKDQFNEGRKGFDLALNLLFAMAFLASTFAVLAAGERAVQAKHLQLVSGVRVATFW
LSALLWDLLSFLVPSLGLLVVFKAFDVHAFTRDGHLADALFLLLLYGWAIIPLMYLLSFL
FSSAATAYTRLTVFNILSGIATFLVVTIMRIPAVKLEELSRTLDHVFLVLPNHCLGMAVS
SFYENYETRQYCTSSEVAIQYCKKYKIQYQENFYAWSSPGVGRFVVSMAASGLGSLVLLF
LLETDLLWQLRARLCTFRRGRMQEDLYTGMTALPEDQDVAVEKNKILSSDLNTLLGTPLI
IKELSKVYPQQAPVRAVHRLCLAVQRGECFGLLGFNGAGKSSTFKMLTGEETVTAGNAFV
GGYSICSDIGKVRQRIGYCPQFDALLDHMTGRETLVMYARLRGLPERHITACVENTLRGL
LLEPHADKLVRTYSGGNKRKLSTGIALLGEPVVIFLDEPSTGMDPVARRLLWDTVARARE
SGKAIVITSHSMEECEALCTRLAIMAQGQLRCLGSPQHLKSRFGSGYALQAKVQSTGQQE
ALEQFKAFVHLTFPGSVLEDEHQGMVHYHLPGEDLSWAQVFSALEKAKEQLGVADYSVSQ
ISLEQVFLSFAHLQPPLETEGP
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctcaggcaactagggttgcttctctggaagaatttcactctgcagagacgg
aaggtcctggtgacggtcctagagcttgtcctgcccctgttgttctccggaatcatgatc
tggcttcgcctgaagatccagtcagagaatgtgcccagtgccaccatctacccacaccag
aatatccagaagctgcctctgttcttcagtttcccacccccggggggcacctgggaactg
gtgtacatcccgtcgcacagccaggctgtgaagggcatcgctcaggctgtaagccagaag
ttgacgcttgacttccgagtgcacggcttcccatcggagaaagagtttgaggactatatc
cgctacgacaatcgctcctcggatgtgctggctgcgctggtgttcgagcatccctttgag
tacagccaggaccccctgccactggcggtccagtaccacctgcgcttcagctacacgcgg
agaaactacatgtgggcacagtcagactcgggtctcccgaaggatactgagggctggcat
acccgttccctcttcccgctcttccccagcccagggcccagggagcccgcagcccctgat
ggtggtgagcctgggtacatccgggagggcttcctggccgtccagcacgcagtggaccgg
gccatcatggagtaccatgccggtgcagcggctcgcgggctgctggagcaggtcactgtg
caggccaagagattcccctttccacccttcacatctgaccccttcatcgtggccgtccag
taccagctgcccttgctgctcatgctgagcttcacctacacggcgctcaccattgtccgg
gccgtggtgcaggagaaggaacggaagctcaaggagtacatgcgcatgatggggctcagc
agttggctacactggagcgcctggttcctcctcttcttcctcttcctcctggtcattgta
tccttcatgacgttgctcttctgtgtcagggtgaagaaggacgtggcggtactggtgcac
agtgacccctcgctggtgctggtcttcctggcctgctttgctatctctaccatctccttc
agcttcatggtcagcagcttcttcagcaaagccaacatggcggccgccgtggggggcttc
ctctacttcctcacctacatcccatacttcttcgttgctccccgctacaacggcatgaca
cagaaccagaagctgctgtcctgcctcttgtccaacgtggccatggccctgggggcccag
ctcctcggcaagtttgaggccaagggggtgggtgtccagtggcgagacctgctgaaccct
gtcacggtggacgatgacttctccttcgggcacgcgctgggcatgttgctgcttgactcg
gtgctctatgtcctggtggcctggtacgtggaggccgtgctgcctggccagtttggagtg
ccccagccctggtacttctttctcctgccctcatactggtgccgaggctcgagaacggcc
ttggggaaggaggatgaagaccccgagaaagccctcaggagcgagtactttgaagccgag
cctgaggacctggtggcagggatcaagatcaaacacatgtcaaagctgttccgtgttggg
agcaagagcaaagctgccgtcagtaacctgagcctcaacctgtatgaggggcagatcacg
gtcctgttgggtcacaatggcgctggcaagaccaccacgctgtccatgctcacgggtctc
tttcccccgagcagtgggcgggcctacatcagtgggtacgagatcactcaagacatggcg
cagatccggaagagcctgggtctatgcccgcagcatgacgtcttgttcgacaacctgacg
gtggcagagcacctgagtttctatgcgcagctgaaaggcctgtcccagcacaagtgccca
gaggaggtcaagcgcctgctgcacattctgggtctggaggaccagcaggacacccgcagc
cgcttcctgagtggaggcacaaagcgcaagctctccattggcatcgctctcatcgcgggc
tccaaggtgctgatgttggatgaacctaccgcaggcatggatgccgtgtccaggagggcc
atctgggacattctccagcagcagaaacgcacccgcaccatcctgctgaccacccacttc
atggacgaggccgacttgctgggggaccgcatcgccatcatggccaagggggaactacag
tgctgcggctcttccttgttcctcaagcagaagtatggtgccggctaccatatgacgctg
gtaaaggaggcgcagtgtgaccctgaggccatcacccagctggtgtggcagcacgtaccc
agtgccaccctggagagcagcgcaggcgccgaactgtccttcatcctccccaaggagagc
acacacaggtttgaaggcctttttacaaagctggagaagcagcagaaggagctgggtatc
gccagctttggagcatctgttaccaccatggaggaggttttcctgcgggttggcaaactt
gtggacagcagcctggatatccaggccatccagctgcctgccctgcagtaccagcatgag
cggcgggccagtgactgggcagtgggcagccagctctgcggggtcatggactcaactgac
agcatcggggcactcattcaggaggagggaggcaccttccagctcaacagtgggcttgcc
ctgcatgcccagcagttctgggccatgctgctgaagaaagccatgttcagctggcgcgag
tggaggctggcagcagcgcaggtgttggtgcccctcagctgcatcacgctggccctgctg
tccatcgactactcagcccagattctcgacgaccctctgctgcgactgacgctgtccgag
tatggccgcaccgtggtgcccttctctgtgcccagcccatcccggctgagcccacagctg
gctgagcactggaaggacatgctgcaggctgagggccaggagccccgtgaggtgctaggt
gacctggaggagttcctgattttcagggcctctgtggaagggggtgccttcaacgagcac
tgcctggccgctgcatccttccaggctgagggctcccgaactgtcatcactgcgctgttc
aacaaccaggcataccacaccccagccacggcactagcccttgtggacaacctgctgttc
aggctgctgtgtggcccgcaggcctctatcaccatctccaactacccacagccccgcagc
actctgcaggtggccaaggaccagttcaacgagggccggaaagggtttgacctcgccctc
aacctgctcttcgccatggccttcctggccagcaccttcgctgtgctggctgcgggcgag
cgggctgtgcaggccaagcatttgcagctggtcagcggcgttcgcgtggccaccttctgg
ctgtcggccttgctgtgggatctgctctccttcctcgtgcccagtctggggctactggtg
gtgttcaaggcgttcgacgtgcacgccttcacgcgggatggccacctggccgacgcactg
ttcctactcctgctctacggctgggcgatcatccccctcatgtacctgctcagcttcctc
ttctcgagcgccgccacggcctacacgcggctcaccgtcttcaacatcctgtccggcatc
gccaccttcctcgtggtcaccatcatgcgcatcccagcggtgaaactggaagaactttcc
agaaccctggaccacgtgttcctggttctgcccaaccattgtctgggcatggctgtaagc
agcttctatgagaactatgaaaccaggcagtactgcacatcatcggaggtggcgatccag
tactgcaagaaatacaagatccagtaccaggagaacttttatgcctggagcagcccggga
gtgggcagattcgtggtctccatggccgcctcagggcttggctcgctggtcctgctcttt
ctgctggagactgacctgctgtggcagctgcgagctcgtctctgcaccttccggaggggc
cgcatgcaggaggatttgtacactggtatgacagcacttccagaggaccaagatgtggct
gttgaaaagaacaagatcctgtcttcggacctgaacaccctgctgggcacacctctgatc
atcaaagagctttccaaggtgtatccgcagcaggcccctgtccgggctgtgcaccggctc
tgcctggccgtgcagcgtggagagtgcttcggcctgctgggcttcaacggagcaggcaag
agcagcaccttcaagatgctgacgggcgaggagacagtgacagctgggaacgcctttgtt
gggggctacagtatctgctcagatattggaaaggtgcggcagcggatcggctactgcccc
cagtttgacgcgctgctggaccacatgacgggtcgagagacgttggtcatgtacgcacgg
ctgcgcggcctccctgagcgtcacatcacagcctgcgtggagaatacgctgcggggcctg
ctcctagagcctcatgctgacaagctggtccggacctacagcggtggcaacaagcggaag
ctgagcaccggcatcgccctcctgggagagcccgtggtgatcttcctggatgagccatcc
actggcatggaccccgtggcccggcgtctgctctgggacacggtggcgcgtgcccgagag
tccggcaaggccattgtcatcacctcccacagcatggaggagtgtgaggctctgtgcaca
cggctggccatcatggcgcagggccagctgaggtgcctgggcagcccgcagcacctcaag
agcagattcggcagtggctacgccctgcaggccaaggtgcagagcactggacagcaggag
gctctggagcagtttaaggccttcgtgcacctcacttttccaggcagcgtcctggaagac
gagcaccaagggatggtccactaccacctgcctggtgaggacctgagctgggcccaggtg
ttcagcgccctggagaaggccaaggagcagctgggcgtcgccgactactccgtgagccag
atctcattggagcaggtcttcctcagctttgcccacctgcagccacccttggagactgaa
ggcccatga
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integrated database retrieval system